SCOPe 2.06: Domain d3r07a1: 3r07 A:1-262

Lineage for d3r07a1 (3r07 A:1-262)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
   contains large mixed beta-sheet

4. Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families)

5. Family d.104.1.3: LplA-like [143642] (6 proteins)
   part of Pfam PF03099

6. Protein automated matches [190542] (1 species)
   not a true protein

7. Species Thermoplasma acidophilum [TaxId:273075] [187517] (3 PDB entries)

8. Domain d3r07a1: 3r07 A:1-262 [215506]
   Other proteins in same PDB: d3r07a2
   automated match to d2arsa1
   complexed with act, mpd

Details for d3r07a1

PDB Entry: 3r07, 2.7 Å

PDB Description: structural analysis of an archaeal lipoylation system. a bi-partite lipoate protein ligase and its e2 lipoyl domain from thermoplasma acidophilum

PDB Compounds: (A:) Lipoate-protein ligase A subunit 1

SCOPe Domain Sequences for d3r07a1:

Sequence, based on SEQRES records:

>d3r07a1 d.104.1.3 (A:1-262) automated matches {Thermoplasma acidophilum [TaxId: 273075]}
megrlllletpgntrmslaydeaiyrsfqygdkpilrfyrhdrsviigyfqvaeeevdld
ymkkngimlarrytgggavyhdlgdlnfsvvrssddmditsmfrtmneavvnslrilgld
arpgelndvsipvnkktdimagekkimgaagamrkgaklwhaamlvhtdldmlsavlkvp
dekfrdkiakstrervanvtdfvdvsidevrnalirgfsetlhidfredtitekeeslar
elfdkkysteewnmgllrkevv

Sequence, based on observed residues (ATOM records):

>d3r07a1 d.104.1.3 (A:1-262) automated matches {Thermoplasma acidophilum [TaxId: 273075]}
megrlllletpgntrmslaydeaiyrsfqygdkpilrfyrhdrsviigyfqvaeeevdld
ymkkngimlarrytgggavyhdlgdlnfsvvrssddmditsmfrtmneavvnslrilgld
arpgelndvsipvgekkimgaagamrkgaklwhaamlvhtdldmlsavlkvpdekfrdki
akstrervanvtdfvdvsidevrnalirgfsetlhidfredtitekeeslarelfdkkys
teewnmgllrkevv

Timeline for d3r07a1:

• d3r07a1 first appeared in SCOPe 2.03, called d3r07a_
  
• d3r07a1 was called d3r07a_ in SCOPe 2.05
  
• d3r07a1 appears in SCOPe 2.07
  
• d3r07a1 appears in the current release, SCOPe 2.08