SCOPe 2.04: Domain d2zf5y2: 2zf5 Y:248-494

Lineage for d2zf5y2 (2zf5 Y:248-494)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.1: Actin-like ATPase domain [53067] (16 families)
   duplication contains two domains of this fold

5. Family c.55.1.0: automated matches [227137] (1 protein)
   not a true family

6. Protein automated matches [226839] (42 species)
   not a true protein

7. Species Thermococcus kodakarensis [TaxId:69014] [225454] (1 PDB entry)

8. Domain d2zf5y2: 2zf5 Y:248-494 [207849]
   automated match to d3ezwd2

Details for d2zf5y2

PDB Entry: 2zf5, 2.4 Å

PDB Description: Crystal Structure of highly thermostable glycerol kinase from a hyperthermophilic archaeon

PDB Compounds: (Y:) glycerol kinase

SCOPe Domain Sequences for d2zf5y2:

Sequence; same for both SEQRES and ATOM records:

>d2zf5y2 c.55.1.0 (Y:248-494) automated matches {Thermococcus kodakarensis [TaxId: 69014]}
aafeagmvkatygtgsfilvntdkmvlysdnllttiawglngrvsyalegsifvtgaavq
wlrdgikiikhaseteelatklesnegvyfvpafvglgapywdqfargiiigitrgtgre
hlaratleaiayltrdvvdemeklvqikelrvdggatandflmqfqadilnrkvirpvvk
ettalgaaylaglavdywadtreiaelwkaerifepkmdektrerlykgwkeavkramgw
akvvdsa

Timeline for d2zf5y2:

• d2zf5y2 first appeared in SCOPe 2.03
  
• d2zf5y2 appears in SCOPe 2.05
  
• d2zf5y2 appears in the current release, SCOPe 2.08