SCOPe 2.04: Domain d2pozd2: 2poz D:119-384

Lineage for d2pozd2 (2poz D:119-384)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families)
   binds metal ion (magnesium or manganese) in conserved site inside barrel
   N-terminal alpha+beta domain is common to this superfamily

5. Family c.1.11.0: automated matches [227196] (1 protein)
   not a true family

6. Protein automated matches [226923] (59 species)
   not a true protein

7. Species Mesorhizobium loti [TaxId:266835] [225267] (1 PDB entry)

8. Domain d2pozd2: 2poz D:119-384 [205578]
   Other proteins in same PDB: d2poza1, d2pozb1, d2pozc1, d2pozd1, d2poze1, d2pozf1, d2pozg1, d2pozh1
   automated match to d2gl5a1

Details for d2pozd2

PDB Entry: 2poz, 2.04 Å

PDB Description: crystal structure of a putative dehydratase from mesorhizobium loti

PDB Compounds: (D:) Putative dehydratase

SCOPe Domain Sequences for d2pozd2:

Sequence, based on SEQRES records:

>d2pozd2 c.1.11.0 (D:119-384) automated matches {Mesorhizobium loti [TaxId: 266835]}
kirdrvrayangwygaadtpdefaraverplkegygalkfyplaqrvgsalqhvtrrsms
aeaielayrrvkavrdaagpeielmvdlsgglttdetirfcrkigeldicfveepcdpfd
ngalkviseqiplpiavgervytrfgfrkifelqacgiiqpdigtagglmetkkicamae
aynmrvaphvcgsslietatlqleanitnfmihehypafkaddgyvevlenppsissgyf
empngpglgavlikrniepylwasct

Sequence, based on observed residues (ATOM records):

>d2pozd2 c.1.11.0 (D:119-384) automated matches {Mesorhizobium loti [TaxId: 266835]}
kirdrvrayangwygaadtpdefaraverplkegygalkfyplaqlqhvtrrsmsaeaie
layrrvkavrdaagpeielmvdlsgglttdetirfcrkigeldicfveepcdpfdngalk
viseqiplpiavgervytrfgfrkifelqacgiiqpdigtagglmetkkicamaeaynmr
vaphvcgsslietatlqleanitnfmihehypafkaddgyvevlenppsissgyfempng
pglgavlikrniepylwasct

Timeline for d2pozd2:

• d2pozd2 first appeared in SCOPe 2.03
  
• d2pozd2 appears in SCOPe 2.05
  
• d2pozd2 appears in the current release, SCOPe 2.08