SCOPe 2.07: Domain d2coga_: 2cog A:

Lineage for d2coga_ (2cog A:)

1. Root: SCOPe 2.07

2. Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)

3. Fold e.17: D-aminoacid aminotransferase-like PLP-dependent enzymes [56751] (1 superfamily)
   2 domains: (1) alpha+beta: beta3-alpha2-beta2; (2) alpha/beta, a part of its mixed sheet forms barrel: n=6, S=8

4. Superfamily e.17.1: D-aminoacid aminotransferase-like PLP-dependent enzymes [56752] (2 families)

5. Family e.17.1.1: D-aminoacid aminotransferase-like PLP-dependent enzymes [56753] (4 proteins)

6. Protein automated matches [190187] (2 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [186926] (6 PDB entries)

8. Domain d2coga_: 2cog A: [203816]
   automated match to d2abjd_
   complexed with 4mv, mg, plp

Details for d2coga_

PDB Entry: 2cog, 2.1 Å

PDB Description: crystal structure of oxidized human cytosolic branched-chain aminotransferase complexed with 4-methylvalerate

PDB Compounds: (A:) branched chain aminotransferase 1, cytosolic

SCOPe Domain Sequences for d2coga_:

Sequence, based on SEQRES records:

>d2coga_ e.17.1.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vgtfkakdlivtpatilkekpdpnnlvfgtvftdhmltvewssefgwekphikplqnlsl
hpgssalhyavelfeglkafrgvdnkirlfqpnlnmdrmyrsavratlpvfdkeelleci
qqlvkldqewvpystsaslyirptfigtepslgvkkptkallfvllspvgpyfssgtfnp
vslwanpkyvrawkggtgdckmggnygsslfaqceavdngcqqvlwlygedhqitevgtm
nlflywinedgeeelatppldgiilpgvtrrcildlahqwgefkvseryltmddlttale
gnrvremfgsgtacvvcpvsdilykgetihiptmengpklasrilskltdiqygreerdw
tivl

Sequence, based on observed residues (ATOM records):

>d2coga_ e.17.1.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vgtfkakdlivtpatilkekpdpnlvfgtvftdhmltvewssefgwekphikplqnlslh
pgssalhyavelfeglkafrgvdnkirlfqpnlnmdrmyrsavratlpvfdkeelleciq
qlvkldqewvpystsaslyirptfigtepslgvkkptkallfvllspvgpyfnpvslwan
pkyvrawkggtgdckmggnygsslfaqceavdngcqqvlwlygedhqitevgtmnlflyw
inedgeeelatppldgiilpgvtrrcildlahqwgefkvseryltmddlttalegnrvre
mfgsgtacvvcpvsdilykgetihiptmengpklasrilskltdiqygreerdwtivl

Timeline for d2coga_:

• d2coga_ first appeared in SCOPe 2.03
  
• d2coga_ appears in SCOPe 2.06
  
• d2coga_ appears in the current release, SCOPe 2.08