SCOPe 2.08: Domain d3emkb1: 3emk B:1-245

Lineage for d3emkb1 (3emk B:1-245)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (319 species)
   not a true protein

7. Species Brucella melitensis [TaxId:29459] [188645] (2 PDB entries)

8. Domain d3emkb1: 3emk B:1-245 [199342]
   Other proteins in same PDB: d3emka2, d3emkb2, d3emkc2, d3emkd2
   automated match to d3emkd_

Details for d3emkb1

PDB Entry: 3emk, 2.5 Å

PDB Description: 2.5a crystal structure of glucose/ribitol dehydrogenase from brucella melitensis

PDB Compounds: (B:) glucose/ribitol dehydrogenase

SCOPe Domain Sequences for d3emkb1:

Sequence, based on SEQRES records:

>d3emkb1 c.2.1.0 (B:1-245) automated matches {Brucella melitensis [TaxId: 29459]}
mfdltgrkalvtgatgglgeaiaralhaqgaivglhgtreeklkelaaelgerifvfpan
lsdreavkalgqkaeeemggvdilvnnagitrdglfvrmsdedwdavltvnltsvfnltr
elthpmmrrrngriinitsivgvtgnpgqanycaskagligfskslaqeiasrnvtvnci
apgfiesamtgklnekqkdaimgnipmkrmgvgadiaaavvylasdeaayvtgqtlhvng
gmami

Sequence, based on observed residues (ATOM records):

>d3emkb1 c.2.1.0 (B:1-245) automated matches {Brucella melitensis [TaxId: 29459]}
mfdltgrkalvtgatgglgeaiaralhaqgaivglhgtrelkelaaelgerifvfpanls
dreavkalgqkaeeemggvdilvnnagitrdglfvrmsdedwdavltvnltsvfnltrel
thpmmrrrngriinitsivgvtgnpgqanycaskagligfskslaqeiasrnvtvnciap
gfikdaimgnipmkrmgvgadiaaavvylasdeaayvtgqtlhvnggmami

Timeline for d3emkb1:

• d3emkb1 first appeared in SCOPe 2.03, called d3emkb_
  
• d3emkb1 appears in SCOPe 2.07