SCOPe 2.06: Domain d3ur8b1: 3ur8 B:24-338

Lineage for d3ur8b1 (3ur8 B:24-338)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.0: automated matches [191314] (1 protein)
   not a true family

6. Protein automated matches [190075] (90 species)
   not a true protein

7. Species Potato (Solanum tuberosum) [TaxId:4113] [193294] (4 PDB entries)

8. Domain d3ur8b1: 3ur8 B:24-338 [195248]
   Other proteins in same PDB: d3ur8a2, d3ur8b2
   automated match to d3em5a_

Details for d3ur8b1

PDB Entry: 3ur8, 1.26 Å

PDB Description: lower-density crystal structure of potato endo-1,3-beta-glucanase

PDB Compounds: (B:) Glucan endo-1,3-beta-D-glucosidase

SCOPe Domain Sequences for d3ur8b1:

Sequence, based on SEQRES records:

>d3ur8b1 c.1.8.0 (B:24-338) automated matches {Potato (Solanum tuberosum) [TaxId: 4113]}
qpigvcygkiannlpsdqdviklynannikkmriyyphtnvfnalkgsnieiildvpnqd
lealanpsnangwvqdnirnhfpdvkfkyiavgnevdpgresgkyarfvgpameniynal
ssaglqnqikvststysglltntypprdsifreeyksfinpiigflarhnlpllaniypy
fghidntnavplsyalfnqqrrndtgyqnlfdalvdsmyfateklggqnieiivsesgwp
seghpaatlknartyytnlinhvkrgagtpkkpgktietylfamfdenekkgeasekhfg
lfnpdqrpkyqlnfn

Sequence, based on observed residues (ATOM records):

>d3ur8b1 c.1.8.0 (B:24-338) automated matches {Potato (Solanum tuberosum) [TaxId: 4113]}
qpigvcygkiannlpsdqdviklynannikkmriyyphtnvfnalkgsnieiildvpnqd
lealanpsnangwvqdnirnhfpdvkfkyiavgnevdpgresgkyarfvgpameniynal
ssaglqnqikvststysglltntypprdsifreeyksfinpiigflarhnlpllaniypy
fghidntnavplsyalfnqtgyqnlfdalvdsmyfateklggqnieiivsesgwpseghp
aatlknartyytnlinhvkrgagtpkkpgktietylfamfdenekkgeasekhfglfnpd
qrpkyqlnfn

Timeline for d3ur8b1:

• d3ur8b1 first appeared in SCOPe 2.02, called d3ur8b_
  
• d3ur8b1 was called d3ur8b_ in SCOPe 2.05
  
• d3ur8b1 appears in SCOPe 2.07
  
• d3ur8b1 appears in the current release, SCOPe 2.08