SCOPe 2.02: Domain d3qpyb_: 3qpy B:

Lineage for d3qpyb_ (3qpy B:)

1. Root: SCOPe 2.02

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.4: Class I DAHP synthetase [51599] (3 proteins)

6. Protein automated matches [190083] (6 species)
   not a true protein

7. Species Neisseria meningitidis [TaxId:122586] [189819] (8 PDB entries)

8. Domain d3qpyb_: 3qpy B: [184558]
   automated match to d1d9ea_
   complexed with cl, gol, na; mutant

Details for d3qpyb_

PDB Entry: 3qpy, 1.95 Å

PDB Description: Crystal structure of a mutant (K57A) of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis

PDB Compounds: (B:) 2-dehydro-3-deoxyphosphooctonate aldolase

SCOPe Domain Sequences for d3qpyb_:

Sequence, based on SEQRES records:

>d3qpyb_ c.1.10.4 (B:) automated matches {Neisseria meningitidis [TaxId: 122586]}
mdikinditlgnnspfvlfgginvlesldstlqtcahyvevtrklgipyifkasfdaanr
ssihsyrgvgleeglkifekvkaefgipvitdvhephqcqpvaevcdviqlpaflarqtd
lvvamaktgnvvnikkpqflspsqmknivekfheagngklilcergssfgydnlvvdmlg
fgvmkqtcgnlpvifdvthslqtrdagsaasggrraqaldlalagmatrlaglfleshpd
pklakcdgpsalplhlledflirikalddliksqpilt

Sequence, based on observed residues (ATOM records):

>d3qpyb_ c.1.10.4 (B:) automated matches {Neisseria meningitidis [TaxId: 122586]}
mdikinditlgnnspfvlfgginvlesldstlqtcahyvevtrklgipyifkasfdaanr
ssihsyrgvgleeglkifekvkaefgipvitdvhephqcqpvaevcdviqlpaflarqtd
lvvamaktgnvvnikkpqflspsqmknivekfheagngklilcergssfgydnlvvdmlg
fgvmkqtcgnlpvifdvthslqrraqaldlalagmatrlaglfleshlledflirikald
dliksqpilt

Timeline for d3qpyb_:

• d3qpyb_ first appeared in SCOPe 2.01
  
• d3qpyb_ appears in SCOPe 2.03
  
• d3qpyb_ appears in the current release, SCOPe 2.08