SCOPe 2.06: Domain d3q6ya_: 3q6y A:

Lineage for d3q6ya_ (3q6y A:)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.50: Acid proteases [50629] (1 superfamily)
   barrel, closed; n=6, S=10, complex topology

4. Superfamily b.50.1: Acid proteases [50630] (4 families)

5. Family b.50.1.2: Pepsin-like [50646] (11 proteins)
   duplication: consists of two similar barrel domains
   N-terminal: barrel, partly opened; n*=6, S*=10

6. Protein automated matches [190156] (4 species)
   not a true protein

7. Species Cryphonectria parasitica [TaxId:5116] [187236] (22 PDB entries)

8. Domain d3q6ya_: 3q6y A: [184235]
   automated match to d1e5oe_
   complexed with 1pe, dms, gol, s47

Details for d3q6ya_

PDB Entry: 3q6y, 1.35 Å

PDB Description: Endothiapepsin in complex with a pyrrolidine based inhibitor

PDB Compounds: (A:) endothiapepsin

SCOPe Domain Sequences for d3q6ya_:

Sequence, based on SEQRES records:

>d3q6ya_ b.50.1.2 (A:) automated matches {Cryphonectria parasitica [TaxId: 5116]}
stgsatttpidslddayitpvqigtpaqtlnldfdtgssdlwvfssettasevdgqtiyt
psksttakllsgatwsisygdgssssgdvytdtvsvggltvtgqavesakkvsssfteds
tidgllglafstlntvsptqqktffdnakasldspvftadlgyhapgtynfgfidttayt
gsitytavstkqgfwewtstgyavgsgtfkstsidgiadtgttllylpatvvsaywaqvs
gakssssvggyvfpcsatlpsftfgvgsarivipgdyidfgpistgssscfggiqssagi
ginifgdvalkaafvvfngattptlgfask

Sequence, based on observed residues (ATOM records):

>d3q6ya_ b.50.1.2 (A:) automated matches {Cryphonectria parasitica [TaxId: 5116]}
stgsatttpidslddayitpvqigtpaqtlnldfdtgssdlwvfssdgqtiytpskstta
kllsgatwssgdvytdtvsvggltvtgqavesakstidgllglafstlntvsptqqktff
dnakasldspvftadlgyhapgtynfgfidttaytgsitytavstkqgfwewtstgyavg
sgtfkstsidgiadtgttllylpatvvsaywaqvsgakssssvggyvfpcsatlpsftfg
vgsarivipgdyidfgpistgssscfggiqssagiginifgdvalkaafvvfngattptl
gfask

Timeline for d3q6ya_:

• d3q6ya_ first appeared in SCOPe 2.01
  
• d3q6ya_ appears in SCOPe 2.05
  
• d3q6ya_ appears in SCOPe 2.07
  
• d3q6ya_ appears in the current release, SCOPe 2.08