SCOPe 2.08: Domain d3pvka_: 3pvk A:

Lineage for d3pvka_ (3pvk A:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.50: Acid proteases [50629] (1 superfamily)
   barrel, closed; n=6, S=10, complex topology

4. Superfamily b.50.1: Acid proteases [50630] (4 families)

5. Family b.50.1.2: Pepsin-like [50646] (11 proteins)
   duplication: consists of two similar barrel domains
   N-terminal: barrel, partly opened; n*=6, S*=10

6. Protein Acid protease [50649] (9 species)

7. Species Yeast (Candida albicans) [TaxId:5476] [50653] (4 PDB entries)

8. Domain d3pvka_: 3pvk A: [183994]
   automated match to d1eaga_
   complexed with bam, imd, mpd, zn

Details for d3pvka_

PDB Entry: 3pvk, 1.27 Å

PDB Description: secreted aspartic protease 2 in complex with benzamidine

PDB Compounds: (A:) Candidapepsin-2

SCOPe Domain Sequences for d3pvka_:

Sequence, based on SEQRES records:

>d3pvka_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]}
avpvtlhneqvtyaaditvgsnnqklnvivdtgssdlwvpdvnvdcqvtysdqtadfckq
kgtydpsgssasqdlntpfkigygdgsssqgtlykdtvgfggvsiknqvladvdstsidq
gilgvgyktneaggsydnvpvtlkkqgviaknayslylnspdaatgqiifggvdnakysg
slialpvtsdrelrislgsvevsgktintdnvdvlldsgttitylqqdladqiikafngk
ltqdsngnsfyevdcnlsgdvvfnfsknakisvpasefaaslqgddgqpydkcqllfdvn
danilgdnflrsayivydlddneislaqvkytsassisal

Sequence, based on observed residues (ATOM records):

>d3pvka_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]}
avpvtlhneqvtyaaditvgsnnqklnvivdtgssdlwvpdvnvdcqvtysdqtadfckq
kgtydpsgssasqdlntpfkigygdgsssqgtlykdtvgfggvsiknqvladvdstsidq
gilgvgyktneaggsydnvpvtlkkqgviaknayslylnspdaatgqiifggvdnakysg
slialpvtsdrelrislgsvevsgktintdnvdvlldsgttitylqqdladqiikafngk
ltqdsngnsfyevdcnlsgdvvfnfsknakisvpasefaaskcqllfdvndanilgdnfl
rsayivydlddneislaqvkytsassisal

Timeline for d3pvka_:

• d3pvka_ first appeared in SCOPe 2.01
  
• d3pvka_ appears in SCOPe 2.07