SCOPe 2.07: Domain d3nkva_: 3nkv A:

Lineage for d3nkva_ (3nkv A:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.8: G proteins [52592] (80 proteins)
   core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest

6. Protein automated matches [190047] (34 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [186768] (286 PDB entries)

8. Domain d3nkva_: 3nkv A: [182345]
   automated match to d2fola1
   complexed with amp, ba, gnp, mg

Details for d3nkva_

PDB Entry: 3nkv, 1.7 Å

PDB Description: crystal structure of rab1b covalently modified with amp at y77

PDB Compounds: (A:) Ras-related protein Rab-1B

SCOPe Domain Sequences for d3nkva_:

Sequence; same for both SEQRES and ATOM records:

>d3nkva_ c.37.1.8 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
eydylfkllligdsgvgksclllrfaddtytesyistigvdfkirtieldgktiklqiwd
tagqerfrtitssyyrgahgiivvydvtdqesyanvkqwlqeidryasenvnkllvgnks
dlttkkvvdnttakefadslgipfletsaknatnveqafmtmaaeikkrm

Timeline for d3nkva_:

• d3nkva_ first appeared in SCOPe 2.01
  
• d3nkva_ appears in SCOPe 2.06
  
• d3nkva_ appears in the current release, SCOPe 2.08