SCOPe 2.08: Domain d3m5rb1: 3m5r B:79-203

Lineage for d3m5rb1 (3m5r B:79-203)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.299: Ns1 effector domain-like [143020] (1 superfamily)
   beta-X-beta(5)-alpha-beta-alpha; 2 layers: a/b; bifurcated beta-sheet; order 23654[1,7]

4. Superfamily d.299.1: Ns1 effector domain-like [143021] (1 family)
   automatically mapped to Pfam PF00600

5. Family d.299.1.1: Ns1 effector domain-like [143022] (2 proteins)
   C-terminal part of Pfam PF00600

6. Protein automated matches [190936] (7 species)
   not a true protein

7. Species Influenza A virus (a/california/07/2009(h1n1)) [TaxId:641809] [189299] (1 PDB entry)

8. Domain d3m5rb1: 3m5r B:79-203 [180873]
   Other proteins in same PDB: d3m5ra2, d3m5rb2
   automated match to d2gx9a1

Details for d3m5rb1

PDB Entry: 3m5r, 2 Å

PDB Description: crystal structure of swine flu virus ns1 effector domain from h1n1 influenza a/california/07/2009

PDB Compounds: (B:) nonstructural protein 1

SCOPe Domain Sequences for d3m5rb1:

Sequence; same for both SEQRES and ATOM records:

>d3m5rb1 d.299.1.1 (B:79-203) automated matches {Influenza A virus (a/california/07/2009(h1n1)) [TaxId: 641809]}
mtiasvptsrylsdmtleemsrdwfmlmprqkiigplcvrldqaimeknivlkanfsvif
nrletlillrafteegaivgeisplpslpghtyedvknavgvligglewngntvrvseni
qrfaw

Timeline for d3m5rb1:

• d3m5rb1 first appeared in SCOPe 2.01, called d3m5rb_
  
• d3m5rb1 appears in SCOPe 2.07