SCOPe 2.08: Domain d3l6ta1: 3l6t A:1-225

Lineage for d3l6ta1 (3l6t A:1-225)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.89: Origin of replication-binding domain, RBD-like [55463] (1 superfamily)
   alpha-beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel sheet 41325

4. Superfamily d.89.1: Origin of replication-binding domain, RBD-like [55464] (6 families)

5. Family d.89.1.0: automated matches [191630] (1 protein)
   not a true family

6. Protein automated matches [191159] (3 species)
   not a true protein

7. Species Escherichia coli [TaxId:562] [189342] (2 PDB entries)

8. Domain d3l6ta1: 3l6t A:1-225 [180007]
   Other proteins in same PDB: d3l6ta2, d3l6tb2
   automated match to d1osbc_
   complexed with cit, cl, edo, mg, na, ni, po4; mutant

Details for d3l6ta1

PDB Entry: 3l6t, 1.93 Å

PDB Description: crystal structure of an n-terminal mutant of the plasmid pcu1 trai relaxase domain

PDB Compounds: (A:) Mobilization protein TraI

SCOPe Domain Sequences for d3l6ta1:

Sequence, based on SEQRES records:

>d3l6ta1 d.89.1.0 (A:1-225) automated matches {Escherichia coli [TaxId: 562]}
mldittitrqnvtsvvgyysdakddyyskdssftswqgtgaealglsgdvesarfkellv
geidtfthmqrhvgdakkerlgydltfsapkgvsmqalihgdktiieahekavaaavrea
eklaqarttrqgksvtqntnnlvvatfrhetsraldpdlhthafvmnmtqredgqwralk
ndelmrnkmhlgdvykqelaleltkagyelrynsknntfdmahfs

Sequence, based on observed residues (ATOM records):

>d3l6ta1 d.89.1.0 (A:1-225) automated matches {Escherichia coli [TaxId: 562]}
mldittitrqnvtsvvgyysdakddyyskdssftswqgtgaealglsgdvesarfkellv
geidtfthmqrhvgdakkerlgydltfsapkgvsmqalihgdktiieahekavaaavrea
eklaqarttrksvtqntnnlvvatfrhetsraldpdlhthafvmnmtqredgqwralknd
elmrnkmhlgdvykqelaleltkagyelrynsknntfdmahfs

Timeline for d3l6ta1:

• d3l6ta1 first appeared in SCOPe 2.01, called d3l6ta_
  
• d3l6ta1 appears in SCOPe 2.07