SCOPe 2.01: Domain d3kbma_: 3kbm A:

Lineage for d3kbma_ (3kbm A:)

1. Root: SCOPe 2.01

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.15: Xylose isomerase-like [51658] (8 families)
   different families share similar but non-identical metal-binding sites

5. Family c.1.15.3: Xylose isomerase [51665] (2 proteins)

6. Protein D-xylose isomerase [51666] (12 species)

7. Species Streptomyces rubiginosus [TaxId:1929] [51670] (28 PDB entries)

8. Domain d3kbma_: 3kbm A: [179238]
   automated match to d1dxia_
   complexed with cd, glc

Details for d3kbma_

PDB Entry: 3kbm, 2 Å

PDB Description: room temperature x-ray structure of d-xylose isomerase complexed with 2cd(2+) co-factors and d12-d-alpha-glucose in the cyclic form

PDB Compounds: (A:) xylose isomerase

SCOPe Domain Sequences for d3kbma_:

Sequence; same for both SEQRES and ATOM records:

>d3kbma_ c.1.15.3 (A:) D-xylose isomerase {Streptomyces rubiginosus [TaxId: 1929]}
mnyqptpedrftfglwtvgwqgrdpfgdatrraldpvesvrrlaelgahgvtfhdddlip
fgssdsereehvkrfrqalddtgmkvpmattnlfthpvfkdggftandrdvrryalrkti
rnidlavelgaetyvawggregaesggakdvrdaldrmkeafdllgeyvtsqgydirfai
epkpneprgdillptvghalafierlerpelygvnpevgheqmaglnfphgiaqalwagk
lfhidlngqngikydqdlrfgagdlraafwlvdllesagysgprhfdfkpprtedfdgvw
asaagcmrnylilkeraaafradpevqealrasrldelarptaadglqallddrsafeef
dvdaaaargmaferldqlamdhllgarg

Timeline for d3kbma_:

• d3kbma_ is new in SCOPe 2.01-stable
  
• d3kbma_ appears in SCOPe 2.02
  
• d3kbma_ appears in the current release, SCOPe 2.08