SCOPe 2.04: Domain d3dpia_: 3dpi A:

Lineage for d3dpia_ (3dpi A:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
   core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145

4. Superfamily c.26.2: Adenine nucleotide alpha hydrolases-like [52402] (7 families)
   share similar mode of ligand (Adenosine group) binding
   can be subdivided into two group with closer relationships within each group than between the groups; the first three families form one group whereas the last two families form the other group

5. Family c.26.2.0: automated matches [191320] (1 protein)
   not a true family

6. Protein automated matches [190116] (16 species)
   not a true protein

7. Species Burkholderia pseudomallei [TaxId:320372] [188500] (2 PDB entries)

8. Domain d3dpia_: 3dpi A: [174155]
   automated match to d1ee1a_
   complexed with act

Details for d3dpia_

PDB Entry: 3dpi, 2.2 Å

PDB Description: crystal structure of nad+ synthetase from burkholderia pseudomallei

PDB Compounds: (A:) NAD+ synthetase

SCOPe Domain Sequences for d3dpia_:

Sequence, based on SEQRES records:

>d3dpia_ c.26.2.0 (A:) automated matches {Burkholderia pseudomallei [TaxId: 320372]}
smsrpdqaarrraiaaelhvsptfdardeaerrigfvadylrtaglracvlgisggidss
tagrlaqlaverlrasgydarfvamrlpygaqhdeadarralafvradetltvdvkpaad
amlaalaagglayldhaqqdfvlgnikarermiaqyavagarngvvigtdhaaesvmgff
tkfgdggadvlplagltkrrvralarmlgadeplvlktptadletlrpqrpdehaygity
eqiddflegkpmddavaetvlrfydatrhkralp

Sequence, based on observed residues (ATOM records):

>d3dpia_ c.26.2.0 (A:) automated matches {Burkholderia pseudomallei [TaxId: 320372]}
smsrpdqaarrraiaaelhvsptfdardeaerrigfvadylrtaglracvlgisggidss
tagrlaqlaverlrasgydarfvamrlpygaeadarralafvradetltvdvkpaadaml
aalaagglayldhaqqdfvlgnikarermiaqyavagarngvvigtdhaaesvmgfftkf
gdggadvlplagltkrrvralarmlgadeplvlktptadletlrpqrphaygityeqidd
flegkpmddavaetvlrfydatrhkralp

Timeline for d3dpia_:

• d3dpia_ first appeared in SCOPe 2.01
  
• d3dpia_ appears in SCOPe 2.03
  
• d3dpia_ appears in SCOPe 2.05
  
• d3dpia_ appears in the current release, SCOPe 2.08