Lineage for d3bi3a_ (3bi3 A:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2070014Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 2070786Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) (S)
    Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold
  5. 2071041Family b.82.2.10: AlkB-like [141628] (3 protein domains)
    automatically mapped to Pfam PF13532
  6. 2071045Protein Alkylated DNA repair protein AlkB [141629] (1 species)
  7. 2071046Species Escherichia coli [TaxId:562] [141630] (10 PDB entries)
    Uniprot P05050 15-214
  8. 2071055Domain d3bi3a_: 3bi3 A: [172643]
    automated match to d2fd8a1
    protein/DNA complex; complexed with akg, mn

Details for d3bi3a_

PDB Entry: 3bi3 (more details), 1.9 Å

PDB Description: X-ray structure of AlkB protein bound to dsDNA containing 1meA/A with cofactors
PDB Compounds: (A:) Alpha-ketoglutarate-dependent dioxygenase AlkB

SCOPe Domain Sequences for d3bi3a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3bi3a_ b.82.2.10 (A:) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d3bi3a_:

Click to download the PDB-style file with coordinates for d3bi3a_.
(The format of our PDB-style files is described here.)

Timeline for d3bi3a_: