Lineage for d2nxik_ (2nxi K:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2834402Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 2835534Family c.1.10.4: Class I DAHP synthetase [51599] (3 proteins)
  6. 2835611Protein 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) [51602] (5 species)
  7. 2835612Species Aquifex aeolicus [TaxId:63363] [63922] (32 PDB entries)
  8. 2835689Domain d2nxik_: 2nxi K: [166437]
    automated match to d1fwna_
    complexed with pep, po4

Details for d2nxik_

PDB Entry: 2nxi (more details), 2.3 Å

PDB Description: structural and mechanistic changes along an engineered path from metallo to non-metallo kdo8p synthase.
PDB Compounds: (K:) 2-dehydro-3-deoxyphosphooctonate aldolase

SCOPe Domain Sequences for d2nxik_:

Sequence, based on SEQRES records: (download)

>d2nxik_ c.1.10.4 (K:) 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) {Aquifex aeolicus [TaxId: 63363]}
kflviagmnaieseelllkvgeeikrlsekfkevefvfkssfdkanrssihsfrghgley
gvkalrkvkeefglkittdiheswqaepvaevadiiqipaflcrqtdlllaaaktgravn
vkkgqflapwdtknvveklkfggakeiyltergttfgynnlvvdfrslpimkqwakviyd
athsvqlpgglgdksggmrefifpliraavavgcdgvfmethpepekalsdastqlplsq
legiieaileirevaskyyeti

Sequence, based on observed residues (ATOM records): (download)

>d2nxik_ c.1.10.4 (K:) 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) {Aquifex aeolicus [TaxId: 63363]}
kflviagmnaieseelllkvgeeikrlsekfkevefvfkssfdkanrssihsfrghgley
gvkalrkvkeefglkittdiheswqaepvaevadiiqipaflcrqtdlllaaaktgravn
vkkgqflapwdtknvveklkfggakeiyltergttfgynnlvvdfrslpimkqwakviyd
athsvqlpgglgmrefifpliraavavgcdgvfmethpepekalsdastqlplsqlegii
eaileirevaskyyeti

SCOPe Domain Coordinates for d2nxik_:

Click to download the PDB-style file with coordinates for d2nxik_.
(The format of our PDB-style files is described here.)

Timeline for d2nxik_: