SCOPe 2.06: Protein: Glycoprotein B

Lineage for Protein: Glycoprotein B

Root: SCOPe 2.06
Class e: Multi-domain proteins (alpha and beta) [56572] (69 folds)

Fold e.76: Viral glycoprotein ectodomain-like [161007] (1 superfamily)
complex fold; contains three rigid, mostly-beta domains and an alpha-helical region, acting as a conformatiomal switch ("fusion stalk")

Superfamily e.76.1: Viral glycoprotein ectodomain-like [161008] (3 families)
Family e.76.1.1: Glycoprotein B-like [161009] (1 protein)
Pfam PF00606; Herpesvirus Glycoprotein B
Protein Glycoprotein B [161010] (1 species)

Species:

Human herpesvirus 1 [TaxId:10298] [161011] (7 PDB entries)
Uniprot P06437 111-725
1. Domains for 2gum:
  1. Domain d2guma1: 2gum A:111-725 [147184]
    complexed with na
  2. Domain d2gumb_: 2gum B: [147185]
    automated match to d2guma1
    complexed with na
  3. Domain d2gumc_: 2gum C: [147186]
    automated match to d2guma1
    complexed with na
2. Domains for 3nw8:
  1. Domain d3nw8a_: 3nw8 A: [248077]
    automated match to d2gumb_
    complexed with cl, mry, na, nag; mutant
  2. Domain d3nw8b_: 3nw8 B: [248078]
    automated match to d2gumb_
    complexed with cl, mry, na, nag; mutant
  3. Domain d3nw8c_: 3nw8 C: [248079]
    automated match to d2gumb_
    complexed with cl, mry, na, nag; mutant
  4. Domain d3nw8d_: 3nw8 D: [248080]
    automated match to d2gumb_
    complexed with cl, mry, na, nag; mutant
3. Domains for 3nwa:
  1. Domain d3nwaa_: 3nwa A: [248081]
    automated match to d2gumb_
    complexed with mry, nag; mutant
  2. Domain d3nwab_: 3nwa B: [248082]
    automated match to d2gumb_
    complexed with mry, nag; mutant
  3. Domain d3nwac_: 3nwa C: [248083]
    automated match to d2gumb_
    complexed with mry, nag; mutant
  4. Domain d3nwad_: 3nwa D: [248084]
    automated match to d2gumb_
    complexed with mry, nag; mutant
4. Domains for 3nwd:
  1. Domain d3nwda_: 3nwd A: [248085]
    automated match to d2gumb_
    complexed with cl, mry, nag; mutant
  2. Domain d3nwdb_: 3nwd B: [248086]
    automated match to d2gumb_
    complexed with cl, mry, nag; mutant
  3. Domain d3nwdc_: 3nwd C: [248087]
    automated match to d2gumb_
    complexed with cl, mry, nag; mutant
  4. Domain d3nwdd_: 3nwd D: [248088]
    automated match to d2gumb_
    complexed with cl, mry, nag; mutant
5. Domains for 3nwf:
  1. Domain d3nwfa_: 3nwf A: [248089]
    automated match to d2gumb_
    complexed with mry, na, nag
  2. Domain d3nwfb_: 3nwf B: [248090]
    automated match to d2gumb_
    complexed with mry, na, nag
  3. Domain d3nwfc_: 3nwf C: [248091]
    automated match to d2gumb_
    complexed with mry, na, nag
  4. Domain d3nwfd_: 3nwf D: [248092]
    automated match to d2gumb_
    complexed with mry, na, nag
6. Domains for 4hsi:
  1. Domain d4hsia_: 4hsi A: [252497]
    automated match to d2gumb_
    complexed with cl, mry, nag; mutant
  2. Domain d4hsib_: 4hsi B: [252498]
    automated match to d2gumb_
    complexed with cl, mry, nag; mutant
  3. Domain d4hsic_: 4hsi C: [252499]
    automated match to d2gumb_
    complexed with cl, mry, nag; mutant
  4. Domain d4hsid_: 4hsi D: [252500]
    automated match to d2gumb_
    complexed with cl, mry, nag; mutant
7. Domains for 4l1r:
  1. Domain d4l1ra_: 4l1r A: [253474]
    automated match to d2gumb_
    complexed with cl, nag; mutant
  2. Domain d4l1rb_: 4l1r B: [253475]
    automated match to d2gumb_
    complexed with cl, nag; mutant

More info for Protein Glycoprotein B from e.76.1.1: Glycoprotein B-like

Timeline for Protein Glycoprotein B from e.76.1.1: Glycoprotein B-like:

Protein Glycoprotein B from e.76.1.1: Glycoprotein B-like first appeared in SCOP 1.75
Protein Glycoprotein B from e.76.1.1: Glycoprotein B-like appears in SCOPe 2.05
Protein Glycoprotein B from e.76.1.1: Glycoprotein B-like appears in SCOPe 2.07
Protein Glycoprotein B from e.76.1.1: Glycoprotein B-like appears in the current release, SCOPe 2.08