SCOP 1.75: Domain d3brmb1: 3brm B:13-327

Lineage for d3brmb1 (3brm B:13-327)

1. Root: SCOP 1.75

2. Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds)

3. Fold e.3: beta-lactamase/transpeptidase-like [56600] (1 superfamily)
   contains a cluster of helices and an alpha+beta sandwich

4. Superfamily e.3.1: beta-lactamase/transpeptidase-like [56601] (3 families)

5. Family e.3.1.2: Glutaminase [90084] (2 proteins)
   Pfam PF04960

6. Protein Probable glutaminase YbgJ [90085] (1 species)

7. Species Bacillus subtilis [TaxId:1423] [90086] (3 PDB entries)

8. Domain d3brmb1: 3brm B:13-327 [155516]
   automatically matched to d1mkia_
   complexed with onl

Details for d3brmb1

PDB Entry: 3brm, 2.29 Å

PDB Description: Crystal structure of the covalent complex between the Bacillus subtilis glutaminase YbgJ and 5-oxo-L-norleucine formed by reaction of the protein with 6-diazo-5-oxo-L-norleucine

PDB Compounds: (B:) Glutaminase 1

SCOP Domain Sequences for d3brmb1:

Sequence, based on SEQRES records:

>d3brmb1 e.3.1.2 (B:13-327) Probable glutaminase YbgJ {Bacillus subtilis [TaxId: 1423]}
npalqlhdwveyyrpfaangqsanyipalgkvndsqlgicvlepdgtmihagdwnvsftm
qsiskvisfiaacmsrgipyvldrvdveptgdafnsiirleinkpgkpfnpminagalti
asilpgesayekleflysvmetligkrpriheevfrsewetahrnralayylketnflea
eveetlevylkqcamesttedialiglilahdgyhpirheqvipkdvaklakalmltcgm
ynasgkyaafvgvpaksgvsggimalvppsarreqpfqsgcgigiygpaideygnsltgg
mllkhmaqewelsif

Sequence, based on observed residues (ATOM records):

>d3brmb1 e.3.1.2 (B:13-327) Probable glutaminase YbgJ {Bacillus subtilis [TaxId: 1423]}
npalqlhdwveyyrpfaangqsanyipalgkvndsqlgicvlepdgtmihagdwnvsftm
qsiskvisfiaacmsrgipyvldrvdveppfnpminagaltiasilpgesayekleflys
vmetligkrpriheevfrsewetahrnralayylketnfleaeveetlevylkqcamest
tedialiglilahdgyhpirheqvipkdvaklakalmltcgmynasgkyaafvgvpaksg
vsggimalvppqpfqsgcgigiygpaideygnsltggmllkhmaqewelsif

Timeline for d3brmb1:

• d3brmb1 is new in SCOP 1.75
  
• d3brmb1 is called d3brmb_ in SCOPe 2.01
  
• d3brmb1 appears in the current release, SCOPe 2.08, called d3brmb_