SCOPe 2.01: Domain d3bofa1: 3bof A:301-560

Lineage for d3bofa1 (3bof A:301-560)

1. Root: SCOPe 2.01

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.21: Dihydropteroate synthetase-like [51717] (3 families)

5. Family c.1.21.2: Methyltetrahydrofolate-utiluzing methyltransferases [51723] (3 proteins)

6. Protein Cobalamin-dependent methionine synthase MetH, C-terminal domain [102104] (1 species)
   5-methyltetrahydrofolate homocysteine S-methyltransferase

7. Species Thermotoga maritima [TaxId:2336] [102105] (8 PDB entries)

8. Domain d3bofa1: 3bof A:301-560 [155445]
   Other proteins in same PDB: d3bofa2, d3bofb2
   automatically matched to d1q7qa1
   complexed with hcs, k, yt3, zn

Details for d3bofa1

PDB Entry: 3bof, 1.7 Å

PDB Description: Cobalamin-dependent methionine synthase (1-566) from Thermotoga maritima complexed with Zn2+ and Homocysteine

PDB Compounds: (A:) 5-methyltetrahydrofolate S-homocysteine methyltransferase

SCOPe Domain Sequences for d3bofa1:

Sequence; same for both SEQRES and ATOM records:

>d3bofa1 c.1.21.2 (A:301-560) Cobalamin-dependent methionine synthase MetH, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
favsspsklvtfdhfvvigerinpagrkklwaemqkgneeivikeaktqvekgaevldvn
fgiesqidvryvekivqtlpyvsnvplsldiqnvdlteralraypgrslfnsakvdeeel
emkinllkkyggtlivllmgkdvpksfeerkeyfekalkilerhdfsdrvifdpgvlplg
aegkpvevlktiefisskgfnttvglsnlsfglpdrsyyntaflvlgiskglssaimnpl
detlmktlnatlvilekkel

Timeline for d3bofa1:

• d3bofa1 first appeared in SCOP 1.75
  
• d3bofa1 appears in SCOPe 2.02
  
• d3bofa1 appears in the current release, SCOPe 2.08