SCOPe 2.01: Domain d2zldb1: 2zld B:1-340

Lineage for d2zldb1 (2zld B:1-340)

1. Root: SCOPe 2.01

2. Class f: Membrane and cell surface proteins and peptides [56835] (57 folds)

3. Fold f.4: Transmembrane beta-barrels [56924] (6 superfamilies)
   not a true fold, gathers together transmembrane barrels of different (n,S)

4. Superfamily f.4.3: Porins [56935] (4 families)

5. Family f.4.3.1: Porin [56936] (2 proteins)
   trimer, one subunit folds into (16,20) barrel

6. Protein Porin [56937] (5 species)

7. Species Escherichia coli, different sequences [TaxId:562] [56938] (15 PDB entries)

8. Domain d2zldb1: 2zld B:1-340 [154631]
   automatically matched to d1opfa_

Details for d2zldb1

PDB Entry: 2zld, 3 Å

PDB Description: Structure of OmpF co-crystallized with T83

PDB Compounds: (B:) Outer membrane protein F

SCOPe Domain Sequences for d2zldb1:

Sequence, based on SEQRES records:

>d2zldb1 f.4.3.1 (B:1-340) Porin {Escherichia coli, different sequences [TaxId: 562]}
aeiynkdgnkvdlygkavglhyfskgngensyggngdmtyarlgfkgetqinsdltgygq
weynfqgnnsegadaqtgnktrlafaglkyadvgsfdygrnygvvydalgytdmlpefgg
dtaysddffvgrvggvatyrnsnffglvdglnfavqylgknerdtarrsngdgvggsisy
eyegfgivgaygaadrtnlqeaqplgngkkaeqwatglkydanniylaanygetrnatpi
tnkftntsgfanktqdvllvaqyqfdfglrpsiaytkskakdvegigdvdlvnyfevgat
yyfnknmstyvdyiinqidsdnklgvgsddtvavgivyqf

Sequence, based on observed residues (ATOM records):

>d2zldb1 f.4.3.1 (B:1-340) Porin {Escherichia coli, different sequences [TaxId: 562]}
aeiynkdgnkvdlygkavglhyfskggensyggngdmtyarlgfkgetqinsdltgygqw
eynfqgnnsegadaqtgnktrlafaglkyadvgsfdygrnygvvydalgytdmlpefggd
taysddffvgrvggvatyrnsnffglvdglnfavqylgknerdtarrsngdgvggsisye
yegfgivgaygaadrtnlqeaqplgngkkaeqwatglkydanniylaanygetrnatpit
nkftntsgfanktqdvllvaqyqfdfglrpsiaytkskakdvegigdvdlvnyfevgaty
yfnknmstyvdyiinqidsdnklgvgsddtvavgivyqf

Timeline for d2zldb1:

• d2zldb1 first appeared in SCOP 1.75
  
• d2zldb1 appears in SCOPe 2.02
  
• d2zldb1 appears in the current release, SCOPe 2.08, called d2zldb_