SCOPe 2.08: Domain d2qban1: 2qba N:1-120

Lineage for d2qban1 (2qba N:1-120)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.188: Prokaryotic ribosomal protein L17 [64262] (1 superfamily)
   alpha-beta-alpha(3)-beta(2); 2 layers: alpha/beta;

4. Superfamily d.188.1: Prokaryotic ribosomal protein L17 [64263] (1 family)
   some topological similarity to ribosomal protein L22
   automatically mapped to Pfam PF01196

5. Family d.188.1.1: Prokaryotic ribosomal protein L17 [64264] (1 protein)

6. Protein Prokaryotic ribosomal protein L17 [64265] (4 species)

7. Species Escherichia coli [TaxId:562] [160270] (27 PDB entries)
   Uniprot P02416 1-127

8. Domain d2qban1: 2qba N:1-120 [150367]
   Other proteins in same PDB: d2qba01, d2qba11, d2qba31, d2qba41, d2qbac1, d2qbac2, d2qbad1, d2qbae1, d2qbaf1, d2qbag1, d2qbag2, d2qbah1, d2qbah2, d2qbai1, d2qbai2, d2qbaj1, d2qbak1, d2qbal1, d2qbam1, d2qbao1, d2qbap1, d2qbaq1, d2qbar1, d2qbas1, d2qbat1, d2qbau1, d2qbav1, d2qbaw1, d2qbax1, d2qbay1, d2qbaz1
   protein/RNA complex; complexed with lll, mg, zn
   protein/RNA complex; complexed with lll, mg, zn

Details for d2qban1

PDB Entry: 2qba, 3.54 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. This file contains the 50S subunit of the first 70S ribosome, with gentamicin bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.

PDB Compounds: (N:) 50S ribosomal protein L17

SCOPe Domain Sequences for d2qban1:

Sequence; same for both SEQRES and ATOM records:

>d2qban1 d.188.1.1 (N:1-120) Prokaryotic ribosomal protein L17 {Escherichia coli [TaxId: 562]}
mrhrksgrqlnrnsshrqamfrnmagslvrheiikttlpkakelrrvveplitlaktdsv
anrrlafartrdneivaklfnelgprfasraggytrilkcgfragdnapmayielvdrse

Timeline for d2qban1:

• d2qban1 first appeared in SCOP 1.75
  
• d2qban1 appears in SCOPe 2.07