SCOPe 2.01: Domain d2bhmd1: 2bhm D:97-235

Lineage for d2bhmd1 (2bhm D:97-235)

1. Root: SCOPe 2.01

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.17: Cystatin-like [54402] (7 superfamilies)
   Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet

4. Superfamily d.17.4: NTF2-like [54427] (31 families)
   has a beta-alpha(2)-beta insertion after the main helix

5. Family d.17.4.26: VirB8-like [160029] (2 proteins)
   Pfam PF04335

6. Protein Type IV secretion system protein VirB8 [160030] (2 species)

7. Species Brucella melitensis [TaxId:29459] [160032] (1 PDB entry)
   Uniprot Q7CEG3 97-235

8. Domain d2bhmd1: 2bhm D:97-235 [146146]
   automatically matched to 2BHM A:97-235

Details for d2bhmd1

PDB Entry: 2bhm, 2.4 Å

PDB Description: crystal structure of virb8 from brucella suis

PDB Compounds: (D:) type IV secretion system protein virb8

SCOPe Domain Sequences for d2bhmd1:

Sequence, based on SEQRES records:

>d2bhmd1 d.17.4.26 (D:97-235) Type IV secretion system protein VirB8 {Brucella melitensis [TaxId: 29459]}
sydtvmdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqgdkaldkqyg
snvrtsvtivsivpngkgigtvrfakttkrtnetgdgetthwiatigyqyvnpslmsesa
rltnplgfnvtsyrvdpem

Sequence, based on observed residues (ATOM records):

>d2bhmd1 d.17.4.26 (D:97-235) Type IV secretion system protein VirB8 {Brucella melitensis [TaxId: 29459]}
sydtvmdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqgdkaldkqyg
snvrtsvtivsivpngkgigtvrfakttkrtgetthwiatigyqyvnpslmsesarltnp
lgfnvtsyrvdpem

Timeline for d2bhmd1:

• d2bhmd1 first appeared in SCOP 1.75
  
• d2bhmd1 appears in SCOPe 2.02
  
• d2bhmd1 appears in the current release, SCOPe 2.08, called d2bhmd_