Lineage for d2i2to1 (2i2t O:2-117)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2883383Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2887539Superfamily c.55.4: Translational machinery components [53137] (3 families) (S)
  5. 2887540Family c.55.4.1: Ribosomal protein L18 and S11 [53138] (2 proteins)
  6. 2887541Protein Ribosomal protein L18 (L18p) [53139] (5 species)
  7. 2887551Species Escherichia coli [TaxId:562] [159642] (29 PDB entries)
    Uniprot P0C018 1-117
  8. 2887556Domain d2i2to1: 2i2t O:2-117 [145455]
    Other proteins in same PDB: d2i2t01, d2i2t11, d2i2t21, d2i2t31, d2i2t41, d2i2tc1, d2i2tc2, d2i2td1, d2i2te1, d2i2tf1, d2i2tg1, d2i2tg2, d2i2th1, d2i2th2, d2i2ti1, d2i2ti2, d2i2tj1, d2i2tk1, d2i2tl1, d2i2tm1, d2i2tn1, d2i2tp1, d2i2tq1, d2i2tr1, d2i2ts1, d2i2tt1, d2i2tu1, d2i2tv1, d2i2tw1, d2i2tx1, d2i2ty1, d2i2tz1
    protein/RNA complex; complexed with mg, zn
    protein/RNA complex; complexed with mg, zn
    has additional insertions and/or extensions that are not grouped together

Details for d2i2to1

PDB Entry: 2i2t (more details), 3.22 Å

PDB Description: Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. This file contains the 50s subunit of one 70s ribosome. The entire crystal structure contains two 70s ribosomes and is described in remark 400.
PDB Compounds: (O:) 50S ribosomal protein L18

SCOPe Domain Sequences for d2i2to1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2i2to1 c.55.4.1 (O:2-117) Ribosomal protein L18 (L18p) {Escherichia coli [TaxId: 562]}
dkksarirratrarrklqelgatrlvvhrtprhiyaqviapngsevlvaastvekaiaeq
lkytgnkdaaaavgkavaeralekgikdvsfdrsgfqyhgrvqaladaareaglqf

SCOPe Domain Coordinates for d2i2to1:

Click to download the PDB-style file with coordinates for d2i2to1.
(The format of our PDB-style files is described here.)

Timeline for d2i2to1: