SCOPe 2.08: Domain d2o4ja1: 2o4j A:123-421

Lineage for d2o4ja1 (2o4j A:123-421)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Vitamin D nuclear receptor [48528] (2 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [101432] (25 PDB entries)

8. Domain d2o4ja1: 2o4j A:123-421 [138908]
   automatically matched to d1rkha_
   complexed with vd4

Details for d2o4ja1

PDB Entry: 2o4j, 1.74 Å

PDB Description: crystal structure of rat vitamin d receptor ligand binding domain complexed with vitiii 17-20z and the nr2 box of drip 205

PDB Compounds: (A:) Vitamin D3 receptor

SCOPe Domain Sequences for d2o4ja1:

Sequence, based on SEQRES records:

>d2o4ja1 a.123.1.1 (A:123-421) Vitamin D nuclear receptor {Norway rat (Rattus norvegicus) [TaxId: 10116]}
klseeqqhiiailldahhktydptyadfrdfrppvrmdgstgsvtldlsplsmlphladl
vsysiqkvigfakmipgfrdltsddqivllkssaievimlrsnqsftmddmswdcgsqdy
kydvtdvskaghtlelieplikfqvglkklnlheeehvllmaicivspdrpgvqdaklve
aiqdrlsntlqtyircrhpppgshqlyakmiqkladlrslneehskqyrslsfqpensmk
ltplvlevfgne

Sequence, based on observed residues (ATOM records):

>d2o4ja1 a.123.1.1 (A:123-421) Vitamin D nuclear receptor {Norway rat (Rattus norvegicus) [TaxId: 10116]}
klseeqqhiiailldahhktydptyadfrdfrppvrmplsmlphladlvsysiqkvigfa
kmipgfrdltsddqivllkssaievimlrsnqsftmddmswdcgsqdykydvtdvskagh
tlelieplikfqvglkklnlheeehvllmaicivspdrpgvqdaklveaiqdrlsntlqt
yircrhpppgshqlyakmiqkladlrslneehskqyrslsfqpensmkltplvlevfgne

Timeline for d2o4ja1:

• d2o4ja1 first appeared in SCOP 1.73
  
• d2o4ja1 appears in SCOPe 2.07