SCOPe 2.08: Domain d2nlzb2: 2nlz B:4-541

Lineage for d2nlzb2 (2nlz B:4-541)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.6: Gamma-glutamyltranspeptidase-like [143906] (4 proteins)
   Pfam PF01019

6. Protein automated matches [190739] (1 species)
   not a true protein

7. Species Bacillus halodurans [TaxId:86665] [187918] (1 PDB entry)

8. Domain d2nlzb2: 2nlz B:4-541 [138366]
   Other proteins in same PDB: d2nlza1, d2nlza2, d2nlzb3, d2nlzc3, d2nlzd3
   automated match to d2nlza1

Details for d2nlzb2

PDB Entry: 2nlz, 2.7 Å

PDB Description: crystal structure of cephalosporin acylase from bacillus halodurans

PDB Compounds: (B:) cephalosporin acylase

SCOPe Domain Sequences for d2nlzb2:

Sequence, based on SEQRES records:

>d2nlzb2 d.153.1.6 (B:4-541) automated matches {Bacillus halodurans [TaxId: 86665]}
mfdpqsypypsrrnvvyakngmvatsqplaaqagldilkaggnaidaaiatataltvlep
tsngigsdafalvwtkgklhglngsgrapmsltmeavkakgyeqelppygvipvtvpgap
gawaelakmygnlplaaslapairyaeegypvtptlakywkaaydrvktewtddvyqpwf
dtfapkgraprvgevwrsqghadtlrsiaesngesfyrgeladqihaffdkhggyltked
lacyrpewvepisidyrgyrvweippngqglvalealnivkgfefyhkdtvdtyhkqiea
mklafvdgmkyvtepsdmsvsveqllsdeyaterrkeigeqaltpepgtpprggtvylat
adgdgnmvsfiqsnymgfgsgvvvpgtgiamqnrghnfsldpnhdnalkpgkrtyhtiip
gfltkndqpigpfgvmggfmqpqghmqvmmntidfglnpqaaldaprwqwtngkqvqvep
tfpvdiaqalvrrghkiqvvldegafgrgqiiwrdpttgvlaggteprtdgqvaaweg

Sequence, based on observed residues (ATOM records):

>d2nlzb2 d.153.1.6 (B:4-541) automated matches {Bacillus halodurans [TaxId: 86665]}
mfdpqsypypsrrnvvyakngmvatsqplaaqagldilkaggnaidaaiatataltvlep
tsngigsdafalvwtkgklhglngsgrapmsltmeavkakgyeqelppygvipvtvpgap
gawaelakmygnlplaaslapairyaeegypvtptlakywkaaydrvktewtddvyqpwf
dtfapkgraprvgevwrsqghadtlrsiaesngesfyrgeladqihaffdkhggyltked
lacyrpewvepisidyrgyrvweippngqglvalealnivkgfefyhkdtvdtyhkqiea
mklafvdgmkyvtepsdmsvsveqllsdeyaterrkeigeqaltpepgtptvylatadgd
gnmvsfiqsnymgfgsgvvvpgtgiamqnrghnfsldpnhdnalkpgkrtyhtiipgflt
kndqpigpfgvmggfmqpqghmqvmmntidfglnpqaaldaprwqwtngkqvqveptfpv
diaqalvrrghkiqvvldegafgrgqiiwrdpttgvlaggteprtdgqvaaweg

Timeline for d2nlzb2:

• d2nlzb2 first appeared in SCOP 1.73, called d2nlzb1
  
• d2nlzb2 appears in SCOPe 2.07