Lineage for d2j08a1 (2j08 A:172-405)

  1. Root: SCOPe 2.02
  2. 1074916Class a: All alpha proteins [46456] (284 folds)
  3. 1093839Fold a.99: Cryptochrome/photolyase FAD-binding domain [48172] (1 superfamily)
    multihelical; consists of two all-alpha subdomains
  4. 1093840Superfamily a.99.1: Cryptochrome/photolyase FAD-binding domain [48173] (1 family) (S)
  5. 1093841Family a.99.1.1: Cryptochrome/photolyase FAD-binding domain [48174] (2 proteins)
  6. 1093842Protein C-terminal domain of DNA photolyase [48175] (3 species)
    N-terminal domain is alpha/beta and binds a light-harvesting cofactor
  7. 1093857Species Thermus thermophilus [TaxId:274] [69083] (5 PDB entries)
  8. 1093862Domain d2j08a1: 2j08 A:172-405 [137893]
    Other proteins in same PDB: d2j08a2
    automatically matched to d1iqra1
    complexed with cl, fad, irf, po4

Details for d2j08a1

PDB Entry: 2j08 (more details), 2.61 Å

PDB Description: thermus dna photolyase with 8-iod-riboflavin antenna chromophore
PDB Compounds: (A:) deoxyribodipyrimidine photo-lyase

SCOPe Domain Sequences for d2j08a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2j08a1 a.99.1.1 (A:172-405) C-terminal domain of DNA photolyase {Thermus thermophilus [TaxId: 274]}
lplpepgeeaalaglrafleaklpryaeerdrldgeggsrlspyfalgvlsprlaaweae
rrggegarkwvaellwrdfsyhllyhfpwmaerpldprfqafpwqedealfqawyegktg
vplvdaamrelhatgflsnrarmnaaqfavkhlllpwkrceeafrhllldgdravnlqgw
qwagglgvdaapyfrvfnpvlqgerhdpegrwlkrwapeypsyapkdpvvdlee

SCOPe Domain Coordinates for d2j08a1:

Click to download the PDB-style file with coordinates for d2j08a1.
(The format of our PDB-style files is described here.)

Timeline for d2j08a1:

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d2j08a2