SCOPe 2.04: Domain d2f8sb1: 2f8s B:3-314

Lineage for d2f8sb1 (2f8s B:3-314)

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.34: SH3-like barrel [50036] (21 superfamilies)
   barrel, partly opened; n*=4, S*=8; meander
   the last strand is interrupted by a turn of 3-10 helix

4. Superfamily b.34.14: PAZ domain [101690] (1 family)

5. Family b.34.14.1: PAZ domain [101691] (6 proteins)

6. Protein automated matches [191296] (2 species)
   not a true protein

7. Species Aquifex aeolicus [TaxId:63363] [255166] (2 PDB entries)

8. Domain d2f8sb1: 2f8s B:3-314 [133142]
   Other proteins in same PDB: d2f8sa2, d2f8sb2
   automated match to d1yvua1
   protein/RNA complex

Details for d2f8sb1

PDB Entry: 2f8s, 3 Å

PDB Description: Crystal structure of Aa-Ago with externally-bound siRNA

PDB Compounds: (B:) Argonaute protein

SCOPe Domain Sequences for d2f8sb1:

Sequence; same for both SEQRES and ATOM records:

>d2f8sb1 b.34.14.1 (B:3-314) automated matches {Aquifex aeolicus [TaxId: 63363]}
keallnlyrieyrpkdttftvfkptheiqkeklnkvrwrvflqtglptfrredefwcagk
vekdtlyltlsngeivelkrvgeeefrgfqnerecqelfrdfltktkvkdkfisdfykkf
rdkitvqgknrkialipevnekvlkseegyfllhldlkfriqpfetlqtllerndfnpkr
irvkpigidfvgrvqdvfkakekgeeffrlcmersthksskkaweellknrelrekaflv
vlekgytypatilkpvltyenledeernevadivrmepgkrlnliryilrryvkalrdyg
wyispeeerakg

Timeline for d2f8sb1:

• d2f8sb1 first appeared in SCOP 1.73
  
• d2f8sb1 appears in SCOPe 2.03
  
• d2f8sb1 appears in SCOPe 2.05
  
• d2f8sb1 appears in the current release, SCOPe 2.08