SCOP 1.75: Domain d2cvca1: 2cvc A:40-544

Lineage for d2cvca1 (2cvc A:40-544)

1. Root: SCOP 1.75

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.138: Multiheme cytochromes [48694] (1 superfamily)
   variable number of helices and little beta structure; not a true fold

4. Superfamily a.138.1: Multiheme cytochromes [48695] (3 families)
   duplication: contains multiple CxxCH motifs

5. Family a.138.1.1: Cytochrome c3-like [48696] (4 proteins)

6. Protein 16-heme cytochrome c HmcA [81940] (1 species)
   tandem repeat of four cytochrome c3-like domains

7. Species Desulfovibrio vulgaris [TaxId:881] [81941] (3 PDB entries)

8. Domain d2cvca1: 2cvc A:40-544 [130860]
   automatically matched to d1h29c_
   complexed with hem

Details for d2cvca1

PDB Entry: 2cvc, 2 Å

PDB Description: crystal structure of high-molecular weight cytochrome c from desulfovibrio vulgaris (hildenborough)

PDB Compounds: (A:) High-molecular-weight cytochrome c precursor

SCOP Domain Sequences for d2cvca1:

Sequence, based on SEQRES records:

>d2cvca1 a.138.1.1 (A:40-544) 16-heme cytochrome c HmcA {Desulfovibrio vulgaris [TaxId: 881]}
ekradlieigamerfgkldlpkvafrhdqhttavtgmgkdcaachkskdgkmslkfmrld
dnsaaelkeiyhancigchtdlakagkktgpqdgecrschnpkpsaasswkeigfdkslh
yrhvaskaikpvgdpqkncgachhvydeaskklvwgknkedscrachgekpvdkrpaldt
aahtacischmdvaktkaetgpvncagchapeaqakfkvvrevprldrgqpdaalilpvp
gkdapremkgtmkpvafdhkaheakandcrtchhvridtctachtvngtadskfvqleka
mhqpdsmrscvgchntrvqqptcagchgfikptksdaqcgvchvaapgfdakqveagall
nlkaeqrsqvaasmlsarpqpkgtfdlndipekvvigsiakeyqpsefphrkivktliag
igedklaatfhiekgtlcqgchhnspasltppkcaschgkpfdadrgdrpglkaayhqqc
mgchdrmkiekpantacvdchkera

Sequence, based on observed residues (ATOM records):

>d2cvca1 a.138.1.1 (A:40-544) 16-heme cytochrome c HmcA {Desulfovibrio vulgaris [TaxId: 881]}
ekradlieigamerfgkldlpkvafrhdqhttavtgmgkdcaachkskdgkmslkfmrld
dnsaaelkeiyhancigchtdlakagkktgpqdgecrschnpkpsaasswkeigfdkslh
yrhvaskaikpvgdpqkncgachhvydeaskklvwgknkedscrachgekpvdkrpaldt
aahtacischmdvaktkaetgpvncagchapeaqakfkvvrevprldrgqpdaalilpvp
gkdapremkgtmkpvafdhkaheakandcrtchhvridtctachtvngtadskfvqleka
mhqpdsmrscvgchntrvqqptcagchgfikptksdaqcgvchvaapgfdakqveagall
nlkaeqrsqvaasmlsarpqpkgtfdlndipekvvigsiakeyqpsefphrkivktliag
igedklaatfhiekgtlcqgchhnspasltppkcaschgkpdrpglkaayhqqcmgchdr
mkiekpantacvdchkera

Timeline for d2cvca1:

• d2cvca1 first appeared in SCOP 1.73
  
• d2cvca1 appears in SCOPe 2.01
  
• d2cvca1 appears in the current release, SCOPe 2.08, called d2cvca_