SCOPe 2.05: Domain d1yvua1: 1yvu A:4-314

Lineage for d1yvua1 (1yvu A:4-314)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.34: SH3-like barrel [50036] (21 superfamilies)
   barrel, partly opened; n*=4, S*=8; meander
   the last strand is interrupted by a turn of 3-10 helix

4. Superfamily b.34.14: PAZ domain [101690] (1 family)

5. Family b.34.14.1: PAZ domain [101691] (6 proteins)

6. Protein Argonaute homologue Aq_1447 [141227] (1 species)
   includes the N-terminal domain

7. Species Aquifex aeolicus [TaxId:63363] [141228] (2 PDB entries)
   Uniprot O67434 4-314

8. Domain d1yvua1: 1yvu A:4-314 [124120]
   Other proteins in same PDB: d1yvua2
   complexed with ca

Details for d1yvua1

PDB Entry: 1yvu, 2.9 Å

PDB Description: Crystal structure of A. aeolicus Argonaute

PDB Compounds: (A:) hypothetical protein aq_1447

SCOPe Domain Sequences for d1yvua1:

Sequence, based on SEQRES records:

>d1yvua1 b.34.14.1 (A:4-314) Argonaute homologue Aq_1447 {Aquifex aeolicus [TaxId: 63363]}
eallnlyrieyrpkdttftvfkptheiqkeklnkvrwrvflqtglptfrredefwcagkv
ekdtlyltlsngeivelkrvgeeefrgfqnerecqelfrdfltktkvkdkfisdfykkfr
dkitvqgknrkialipevnekvlkseegyfllhldlkfriqpfetlqtllerndfnpkri
rvkpigidfvgrvqdvfkakekgeeffrlcmersthksskkaweellknrelrekaflvv
lekgytypatilkpvltyenledeernevadivrmepgkrlnliryilrryvkalrdygw
yispeeerakg

Sequence, based on observed residues (ATOM records):

>d1yvua1 b.34.14.1 (A:4-314) Argonaute homologue Aq_1447 {Aquifex aeolicus [TaxId: 63363]}
eallnlyrieyrpkdttftvfkptheiqkeklnkvrwrvflqtglptfrredefwcagkv
ekdtlyltlsngeivelkrvgeeefrgfqnerecqelfrdfltktkvkdkfisdfykkfr
dkitvqgknrkialipevnekvlkseegyfllhldlkfriqpfetlqtllerndfnpkri
rvkpigidfvgrvqdvfkakekgeeffrlcmersthksskkaweellknrelrekaflvv
lekgytypatilkpvltyernevadivrmepgkrlnliryilrryvkalrdygwyispee
erakg

Timeline for d1yvua1:

• d1yvua1 first appeared in SCOP 1.73
  
• d1yvua1 appears in SCOPe 2.04
  
• d1yvua1 appears in SCOPe 2.06
  
• d1yvua1 appears in the current release, SCOPe 2.08