SCOPe 2.01: Domain d1xy3d2: 1xy3 D:137-295

Lineage for d1xy3d2 (1xy3 D:137-295)

1. Root: SCOPe 2.01

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.96: T-fold [55619] (2 superfamilies)
   beta(2)-alpha(2)-beta(2); 2 layers: alpha/beta; antiparallel sheet 1234
   tunnel-shaped: its known members form wide oligomeric barrels different sizes

4. Superfamily d.96.1: Tetrahydrobiopterin biosynthesis enzymes-like [55620] (4 families)
   bind purine or pterin in topologically similar sites between subunits

5. Family d.96.1.4: Urate oxidase (uricase) [55633] (1 protein)

6. Protein Urate oxidase (uricase) [55634] (3 species)
   duplication: one subunit consists of two domains of this fold; beta-sheets of two subunits form a barrel, closed: n=16, S=16

7. Species Aspergillus flavus [TaxId:5059] [55635] (22 PDB entries)

8. Domain d1xy3d2: 1xy3 D:137-295 [122448]
   automatically matched to d1r56c2
   complexed with gun

Details for d1xy3d2

PDB Entry: 1xy3, 3.2 Å

PDB Description: urate oxidase from aspergillus flavus complexed with guanine

PDB Compounds: (D:) Uricase

SCOPe Domain Sequences for d1xy3d2:

Sequence; same for both SEQRES and ATOM records:

>d1xy3d2 d.96.1.4 (D:137-295) Urate oxidase (uricase) {Aspergillus flavus [TaxId: 5059]}
gkgidiksslsgltvlkstnsqfwgflrdeyttlketwdrilstdvdatwqwknfsglqe
vrshvpkfdatwatarevtlktfaednsasvqatmykmaeqilarqqlietveyslpnkh
yfeidlswhkglqntgknaevfapqsdpnglikctvgrs

Timeline for d1xy3d2:

• d1xy3d2 first appeared in SCOP 1.73
  
• d1xy3d2 appears in SCOP 1.75
  
• d1xy3d2 appears in SCOPe 2.02
  
• d1xy3d2 appears in the current release, SCOPe 2.08