SCOPe 2.03: Domain d1y14a_: 1y14 A:

Lineage for d1y14a_ (1y14 A:)

1. Root: SCOPe 2.03

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.60: SAM domain-like [47768] (16 superfamilies)
   4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins

4. Superfamily a.60.8: HRDC-like [47819] (4 families)

5. Family a.60.8.2: RNA polymerase II subunit RBP4 (RpoF) [69044] (1 protein)

6. Protein RNA polymerase II subunit RBP4 (RpoF) [69045] (3 species)
   includes the N-terminal heterodimerisation alpha-hairpin

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [116939] (1 PDB entry)
   Uniprot P20433 46-221

8. Domain d1y14a_: 1y14 A: [116322]
   Other proteins in same PDB: d1y14b1, d1y14b2, d1y14d1, d1y14d2

Details for d1y14a_

PDB Entry: 1y14, 2.3 Å

PDB Description: Crystal structure of yeast subcomplex of Rpb4 and Rpb7

PDB Compounds: (A:) DNA-directed RNA polymerase II 32 kDa polypeptide

SCOPe Domain Sequences for d1y14a_:

Sequence, based on SEQRES records:

>d1y14a_ a.60.8.2 (A:) RNA polymerase II subunit RBP4 (RpoF) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
elialnlsearlvikealverrrafkrsqkkhkkkhlkhenandettavededddldedd
vnaddddfmhsetrekelesidvlleqttggnnkdlkntmqyltnfsrfrdqetvgaviq
llkstglhpfevaqlgslacdtadeaktlipslnnkisddelerilkelsnletly

Sequence, based on observed residues (ATOM records):

>d1y14a_ a.60.8.2 (A:) RNA polymerase II subunit RBP4 (RpoF) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
elialnlsearlvikealverrrafkrsqtrekelesidvlleqttggnnkdlkntmqyl
tnfsrfrdqetvgaviqllkstglhpfevaqlgslacdtadeaktlipslnnkisddele
rilkelsnletly

Timeline for d1y14a_:

• d1y14a_ first appeared in SCOP 1.71
  
• d1y14a_ appears in SCOPe 2.02
  
• d1y14a_ appears in SCOPe 2.04
  
• d1y14a_ appears in the current release, SCOPe 2.08