SCOPe 2.08: Domain d1ss6a1: 1ss6 A:3-102

Lineage for d1ss6a1 (1ss6 A:3-102)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.245: NSFL1 (p97 ATPase) cofactor p47, SEP domain [102847] (1 superfamily)
   beta(3)-alpha(2)-beta; 2 layers; mixed beta-sheet, order 4123, strands 1 and 4 are parallel to each other

4. Superfamily d.245.1: NSFL1 (p97 ATPase) cofactor p47, SEP domain [102848] (1 family)

5. Family d.245.1.1: NSFL1 (p97 ATPase) cofactor p47, SEP domain [102849] (1 protein)

6. Protein NSFL1 (p97 ATPase) cofactor p47, SEP domain [102850] (2 species)

7. Species Human (Homo sapiens) [TaxId:9606] [117860] (1 PDB entry)
   Uniprot Q9UNZ2 171-270

8. Domain d1ss6a1: 1ss6 A:3-102 [112112]
   Other proteins in same PDB: d1ss6a2
   includes linker to the UBX domain

Details for d1ss6a1

PDB Entry: 1ss6

PDB Description: solution structure of sep domain from human p47

PDB Compounds: (A:) NSFL1 cofactor p47

SCOPe Domain Sequences for d1ss6a1:

Sequence; same for both SEQRES and ATOM records:

>d1ss6a1 d.245.1.1 (A:3-102) NSFL1 (p97 ATPase) cofactor p47, SEP domain {Human (Homo sapiens) [TaxId: 9606]}
ekrqhssqdvhvvlklwksgfsldngelrsyqdpsnaqflesirrgevpaelrrlahggq
vnldmedhrdedfvkpkgafkaftgegqklgstapqvlst

Timeline for d1ss6a1:

• d1ss6a1 first appeared in SCOP 1.71, called d1ss6a_
  
• d1ss6a1 appears in SCOPe 2.07