SCOPe 2.05: Domain d1vkda_: 1vkd A:

Lineage for d1vkda_ (1vkd A:)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.67: 5-bladed beta-propeller [50933] (3 superfamilies)
   consists of five 4-stranded beta-sheet motifs; meander

4. Superfamily b.67.2: Arabinanase/levansucrase/invertase [75005] (6 families)

5. Family b.67.2.4: TM1225-like predicted glycosylases [110284] (2 proteins)
   Pfam PF04041 DUF377

6. Protein Hypothetical protein TM1225 [110285] (1 species)

7. Species Thermotoga maritima [TaxId:2336] [110286] (1 PDB entry)
   Uniprot Q9X0V2

8. Domain d1vkda_: 1vkd A: [108644]
   Structural genomics target
   complexed with trs

Details for d1vkda_

PDB Entry: 1vkd, 2.1 Å

PDB Description: crystal structure of a predicted glycosidase (tm1225) from thermotoga maritima msb8 at 2.10 a resolution

PDB Compounds: (A:) conserved hypothetical protein TM1225

SCOPe Domain Sequences for d1vkda_:

Sequence; same for both SEQRES and ATOM records:

>d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]}
hmkvftekipnipweerpegytgpvwrysknpiigrnpvpkgarvfnsavvpyngefvgv
fridhkntrpflhfgrskdginweiepeeiqwvdvngepfqpsyaydprvvkiedtyyit
fctddhgptigvgmtkdfktfvrlpnayvpfnrngvlfprkingkyvmlnrpsdnghtpf
gdiflsespdmihwgnhrfvlgrssynwwenlkigagpypietsegwlliyhgvtltcng
yvysfgaalldlddpskvlyrsryylltpeeeyetvgfvpnvvfpcaalcdadtgrvaiy
ygaadthvalafgyideivdfvkrnsm

Timeline for d1vkda_:

• d1vkda_ first appeared in SCOP 1.69
  
• d1vkda_ appears in SCOPe 2.04
  
• d1vkda_ is called d1vkda1 in SCOPe 2.06
  
• d1vkda_ appears in the current release, SCOPe 2.08, called d1vkda1