SCOPe 2.07: Domain d1rm4b2: 1rm4 B:149-312

Lineage for d1rm4b2 (1rm4 B:149-312)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.81: FwdE/GAPDH domain-like [55346] (4 superfamilies)
   core: alpha-beta-alpha-beta(3); mixed sheet: 2134, strand 2 is parallel to strand 1

4. Superfamily d.81.1: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain [55347] (5 families)
   N-terminal domain is the classic Rossmann-fold

5. Family d.81.1.1: GAPDH-like [55348] (6 proteins)
   has many additional secondary structures

6. Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [55349] (21 species)

7. Species Spinach (Spinacia oleracea) [TaxId:3562] [69769] (8 PDB entries)
   Uniprot P19866

8. Domain d1rm4b2: 1rm4 B:149-312 [105003]
   Other proteins in same PDB: d1rm4a1, d1rm4b1, d1rm4o1
   complexed with ndp, so4

Details for d1rm4b2

PDB Entry: 1rm4, 2 Å

PDB Description: Crystal structure of recombinant photosynthetic glyceraldehyde-3-phosphate dehydrogenase A4 isoform, complexed with NADP

PDB Compounds: (B:) Glyceraldehyde 3-phosphate dehydrogenase A

SCOPe Domain Sequences for d1rm4b2:

Sequence; same for both SEQRES and ATOM records:

>d1rm4b2 d.81.1.1 (B:149-312) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}
cttnclapfvkvldqkfgiikgtmttthsytgdqrlldashrdlrraraaclnivptstg
aakavalvlpnlkgklngialrvptpnvsvvdlvvqvskktfaeevnaafresadnelkg
ilsvcdeplvsidfrctdvsstidssltmvmgddmvkviawyd

Timeline for d1rm4b2:

• d1rm4b2 first appeared in SCOP 1.69
  
• d1rm4b2 appears in SCOPe 2.06
  
• d1rm4b2 appears in the current release, SCOPe 2.08