SCOPe 2.04: Domain d1r8jb2: 1r8j B:1-135

Lineage for d1r8jb2 (1r8j B:1-135)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
   3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345

4. Superfamily c.23.1: CheY-like [52172] (8 families)

5. Family c.23.1.5: N-terminal domain of the circadian clock protein KaiA [82344] (1 protein)
   lacks canonical receiver domains features

6. Protein N-terminal domain of the circadian clock protein KaiA [82345] (1 species)

7. Species Synechococcus elongatus [TaxId:32046] [82346] (3 PDB entries)
   Uniprot Q79PF6

8. Domain d1r8jb2: 1r8j B:1-135 [104850]
   Other proteins in same PDB: d1r8ja1, d1r8jb1
   structured linker 136-176 in swapped dimer

Details for d1r8jb2

PDB Entry: 1r8j, 2.03 Å

PDB Description: Crystal Structure of Circadian Clock Protein KaiA from Synechococcus elongatus

PDB Compounds: (B:) KaiA

SCOPe Domain Sequences for d1r8jb2:

Sequence, based on SEQRES records:

>d1r8jb2 c.23.1.5 (B:1-135) N-terminal domain of the circadian clock protein KaiA {Synechococcus elongatus [TaxId: 32046]}
vlsqiaiciwvestailqdcqralsadryqlqvcesgemlleyaqthrdqidclilvaan
psfravvqqlcfegvvvpaivvgdrdsedpdepakeqlyhsaelhlgihqleqlpyqvda
alaeflrlapvetma

Sequence, based on observed residues (ATOM records):

>d1r8jb2 c.23.1.5 (B:1-135) N-terminal domain of the circadian clock protein KaiA {Synechococcus elongatus [TaxId: 32046]}
vlsqiaiciwvestailqdcqralsadryqlqvcesgemlleyaqthrdqidclilvaan
psfravvqqlcfegvvvpaivvgdpakeqlyhsaelhlgihqleqlpyqvdaalaeflrl
apvetma

Timeline for d1r8jb2:

• d1r8jb2 first appeared in SCOP 1.69
  
• d1r8jb2 appears in SCOPe 2.03
  
• d1r8jb2 appears in SCOPe 2.05
  
• d1r8jb2 appears in the current release, SCOPe 2.08