SCOPe 2.07: Protein: Trigger factor ribosome-binding domain

Lineage for Protein: Trigger factor ribosome-binding domain

Root: SCOPe 2.07
Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

Fold d.241: Ribosome binding domain-like [100965] (2 superfamilies)
beta-(2)-alpha(2)-beta(2); 2 layers: beta/alpha; antiparallel beta-sheet: order 1243; topological similarity to the common core of ribosomal proteins L23 and L15e

Superfamily d.241.2: Trigger factor ribosome-binding domain [102735] (2 families)
automatically mapped to Pfam PF05697
Family d.241.2.1: Trigger factor ribosome-binding domain [102736] (1 protein)
Protein Trigger factor ribosome-binding domain [102737] (2 species)

Species:

Escherichia coli [TaxId:562] [102738] (4 PDB entries)
Uniprot P22257
1. Domains for 1oms:
  1. Domain d1omsa_: 1oms A: [93350]
    Other proteins in same PDB: d1omsc2
    complexed with gol, pg4, so2, so4
  2. Domain d1omsb_: 1oms B: [93351]
    Other proteins in same PDB: d1omsc2
    complexed with gol, pg4, so2, so4
  3. Domain d1omsc1: 1oms C:1-117 [93352]
    Other proteins in same PDB: d1omsc2
    complexed with gol, pg4, so2, so4
2. Domains for 1p9y:
  1. Domain d1p9ya_: 1p9y A: [94402]
    complexed with acy; mutant
  2. Domain d1p9yb_: 1p9y B: [94403]
    complexed with acy; mutant
3. Domains for 1w26:
  1. Domain d1w26a2: 1w26 A:1-131 [109086]
    Other proteins in same PDB: d1w26a1, d1w26a3, d1w26b1, d1w26b3
  2. Domain d1w26b2: 1w26 B:1-131 [109089]
    Other proteins in same PDB: d1w26a1, d1w26a3, d1w26b1, d1w26b3
4. Domain for 2vrh:
  - Domain d2vrha2: 2vrh A:1-131 [153507]
    Other proteins in same PDB: d2vrha1, d2vrha3, d2vrhb1, d2vrhc1, d2vrhd1
    automatically matched to d1w26a2
    protein/RNA complex
Vibrio cholerae [TaxId:666] [110787] (1 PDB entry)
Uniprot Q9KQS5
- Domains for 1t11:
  1. Domain d1t11a2: 1t11 A:1-129 [106237]
    Other proteins in same PDB: d1t11a1, d1t11a3, d1t11a4, d1t11b1, d1t11b3, d1t11b4
  2. Domain d1t11b2: 1t11 B:1-129 [106240]
    Other proteins in same PDB: d1t11a1, d1t11a3, d1t11a4, d1t11b1, d1t11b3, d1t11b4

More info for Protein Trigger factor ribosome-binding domain from d.241.2.1: Trigger factor ribosome-binding domain

Timeline for Protein Trigger factor ribosome-binding domain from d.241.2.1: Trigger factor ribosome-binding domain:

Protein Trigger factor ribosome-binding domain from d.241.2.1: Trigger factor ribosome-binding domain first appeared in SCOP 1.67
Protein Trigger factor ribosome-binding domain from d.241.2.1: Trigger factor ribosome-binding domain appears in SCOPe 2.06
Protein Trigger factor ribosome-binding domain from d.241.2.1: Trigger factor ribosome-binding domain appears in the current release, SCOPe 2.08