SCOPe 2.06: Domain d1vica1: 1vic A:2-254

Lineage for d1vica1 (1vic A:2-254)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest

4. Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families)

5. Family c.68.1.13: Cytidylytransferase [68901] (7 proteins)

6. Protein CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase [64143] (3 species)

7. Species Haemophilus influenzae [TaxId:727] [102607] (2 PDB entries)

8. Domain d1vica1: 1vic A:2-254 [100756]
   Other proteins in same PDB: d1vica2
   structural genomics

Details for d1vica1

PDB Entry: 1vic, 1.8 Å

PDB Description: crystal structure of cmp-kdo synthetase

PDB Compounds: (A:) 3-deoxy-manno-octulosonate cytidylyltransferase

SCOPe Domain Sequences for d1vica1:

Sequence; same for both SEQRES and ATOM records:

>d1vica1 c.68.1.13 (A:2-254) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Haemophilus influenzae [TaxId: 727]}
sftviiparfassrlpgkpladikgkpmiqhvfekalqsgasrviiatdnenvadvaksf
gaevcmtsvnhnsgterlaevveklaipdneiivniqgdeplippvivrqvadnlakfnv
nmaslavkihdaeelfnpnavkvltdkdgyvlyfsrsvipydrdqfmnlqdvqkvqlsda
ylrhigiyayragfikqyvqwaptqlenlekleqlrvlyngerihvelakevpavgvdta
edlekvrailaan

Timeline for d1vica1:

• d1vica1 first appeared in SCOP 1.67, called d1vica_
  
• d1vica1 was called d1vica_ in SCOPe 2.05
  
• d1vica1 appears in SCOPe 2.07
  
• d1vica1 appears in the current release, SCOPe 2.08