Lineage for d3rvba2 (3rvb A:326-630)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2865683Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2865684Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families) (S)
    division into families based on beta-sheet topologies
  5. 2870435Family c.37.1.14: RNA helicase [52724] (7 proteins)
    duplication: consists of two similar domains, one binds NTP and the other binds RNA; also contains an all-alpha subdomain in the C-terminal extension
  6. 2870448Protein HCV helicase domain, C-terminal domain [418963] (1 species)
  7. 2870449Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] [419425] (15 PDB entries)
  8. 2870457Domain d3rvba2: 3rvb A:326-630 [260021]
    Other proteins in same PDB: d3rvba1
    automated match to d1cu1a3
    complexed with cl, i79, mg

    has additional subdomain(s) that are not in the common domain

Details for d3rvba2

PDB Entry: 3rvb (more details), 2.2 Å

PDB Description: The structure of HCV NS3 helicase (Heli-80) bound with inhibitor ITMN-3479
PDB Compounds: (A:) RNA helicase

SCOPe Domain Sequences for d3rvba2:

Sequence; same for both SEQRES and ATOM records: (download)

>d3rvba2 c.37.1.14 (A:326-630) HCV helicase domain, C-terminal domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
pgsvtvphpnieevalsntgeipfygkaipievirggrhlifchskkkcdelaaklsalg
lnavayyrgldvsviptsgdvvvvatdalmtgytgdfdsvidcntcvtqtvdfsldptft
idtttvpqdavsrsqrrgrtgrgrrgiyrfvtpgerpsgmfdssvlcecydagcawyelt
paetsvrlraylntpglpvcqdhlefwesvftglthidahflsqtkqagdnfpylvayqa
tvcaraqapppswdqmwksltrlkptlhgptpllyrlgalqnevtlthpvtkfimacmsa
dlevv

SCOPe Domain Coordinates for d3rvba2:

Click to download the PDB-style file with coordinates for d3rvba2.
(The format of our PDB-style files is described here.)

Timeline for d3rvba2:

View in 3D
Domains from same chain:
(mouse over for more information)
d3rvba1