Lineage for d2cy7a1 (2cy7 A:10-373)

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1398964Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 1398965Superfamily d.3.1: Cysteine proteinases [54001] (23 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 1399680Family d.3.1.22: Autophagin-like [159858] (3 proteins)
    Pfam PF03416
  6. 1399687Protein Cysteine protease ATG4B [159861] (1 species)
    Autophagin-1
  7. 1399688Species Human (Homo sapiens) [TaxId:9606] [159862] (3 PDB entries)
    Uniprot Q9Y4P1 10-373! Uniprot Q9Y4P1 5-354
  8. 1399690Domain d2cy7a1: 2cy7 A:10-373 [146431]
    automatically matched to 2D1I A:10-373

Details for d2cy7a1

PDB Entry: 2cy7 (more details), 1.9 Å

PDB Description: The crystal structure of human Atg4B
PDB Compounds: (A:) Cysteine protease APG4B

SCOPe Domain Sequences for d2cy7a1:

Sequence, based on SEQRES records: (download)

>d2cy7a1 d.3.1.22 (A:10-373) Cysteine protease ATG4B {Human (Homo sapiens) [TaxId: 9606]}
tlrfaefedfpetsepvwilgrkysiftekdeilsdvasrlwftyrknfpaiggtgptsd
tgwgcmlrcgqmifaqalvcrhlgrdwrwtqrkrqpdsyfsvlnafidrkdsyysihqia
qmgvgegksigqwygpntvaqvlkklavfdtwsslavhiamdntvvmeeirrlcrtsvpc
agatafpadsdrhcngfpagaevtnrpspwrplvlliplrlgltdineayvetlkhcfmm
pqslgviggkpnsahyfigyvgeeliyldphttqpaveptdgcfipdesfhcqhppcrms
iaeldpsiavgffckteddfndwcqqvkklsllggalpmfelveqqpshlacpdvlnlsl
dssd

Sequence, based on observed residues (ATOM records): (download)

>d2cy7a1 d.3.1.22 (A:10-373) Cysteine protease ATG4B {Human (Homo sapiens) [TaxId: 9606]}
tlrfaefedfpetsepvwilgrkysiftekdeilsdvasrlwftyrknfpaiggtgptsd
tgwgcmlrcgqmifaqalvcrhlgrdwrwtqrkrqpdsyfsvlnafidrkdsyysihqia
qmgvgegksigqwygpntvaqvlkklavfdtwsslavhiamdntvvmeeirrlcrtsvpc
spwrplvlliplrlgltdineayvetlkhcfmmpqslgviggkpnsahyfigyvgeeliy
ldphttqpavegcfipdesfhcqhppcrmsiaeldpsiavgffckteddfndwcqqvkkl
sllpmfelveqqpdvlnlsldssd

SCOPe Domain Coordinates for d2cy7a1:

Click to download the PDB-style file with coordinates for d2cy7a1.
(The format of our PDB-style files is described here.)

Timeline for d2cy7a1: