Lineage for d2bnda1 (2bnd A:5-241)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2905127Fold c.73: Carbamate kinase-like [53632] (1 superfamily)
    3 layers: a/b/a; mixed (mainly parallel) beta-sheet of 8 strands, order 34215786; strand 8 is antiparallel to the rest
  4. 2905128Superfamily c.73.1: Carbamate kinase-like [53633] (4 families) (S)
    the sheet topology is similar to those of undecaprenyl diphosphate synthase and the N-terminal domain of phosphoglycerate kinase
  5. 2905205Family c.73.1.3: PyrH-like [142721] (4 proteins)
    part of Pfam PF00696
  6. 2905225Protein Uridylate kinase PyrH [142728] (6 species)
  7. 2905229Species Escherichia coli [TaxId:562] [142730] (1 PDB entry)
    Uniprot P0A7E9 4-240
  8. 2905230Domain d2bnda1: 2bnd A:5-241 [128822]
    Other proteins in same PDB: d2bndb_
    complexed with gol, pop, udp

Details for d2bnda1

PDB Entry: 2bnd (more details), 2.6 Å

PDB Description: the structure of e.coli ump kinase in complex with udp
PDB Compounds: (A:) uridylate kinase

SCOPe Domain Sequences for d2bnda1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2bnda1 c.73.1.3 (A:5-241) Uridylate kinase PyrH {Escherichia coli [TaxId: 562]}
akpvykrillklsgealqgtegfgidasildrmaqeikelvelgiqvgvvigggnlfrga
glakagmnrvvgdhmgmlatvmnglamrdalhrayvnarlmsaiplnavcdsyswaeais
llrnnrvvilsagtgnpffttdsaaclrgieieanvvlkatkvdgvftadpakdptatmy
eqltysevlekelkvmdlaaftlardhklpirvfnmnkpgalrrvvmgekegtlite

SCOPe Domain Coordinates for d2bnda1:

Click to download the PDB-style file with coordinates for d2bnda1.
(The format of our PDB-style files is described here.)

Timeline for d2bnda1: