Lineage for d1zupa1 (1zup A:1-301)
- Root: SCOPe 2.05
Class c: Alpha and beta proteins (a/b) [51349] (148 folds) 
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the restSuperfamily c.55.3: Ribonuclease H-like [53098] (15 families) 
consists of one domain of this fold
Family c.55.3.11: TM1739-like [142505] (1 protein)
Pfam PF04251; DUF430; particular similarity to the PIWI domain familyProtein Hypothetical protein TM1739 [142506] (1 species) Species Thermotoga maritima [TaxId:2336] [142507] (1 PDB entry)
Uniprot Q9X261 1-301
Domain d1zupa1: 1zup A:1-301 [125681]
Details for d1zupa1
PDB Entry: 1zup (more details), 2.2 Å
PDB Description: crystal structure of a putative nuclease with a ribonuclease h-like motif fold (tm1739) from thermotoga maritima at 2.20 a resolution
PDB Compounds: (A:) hypothetical protein TM1739SCOPe Domain Sequences for d1zupa1:
Sequence, based on SEQRES records: (download)
>d1zupa1 c.55.3.11 (A:1-301) Hypothetical protein TM1739 {Thermotoga maritima [TaxId: 2336]}
mqvrieraerieseleehvgdqtfveesrfleedeqregeildqiifvdgkrrsfvritt
degitgifaelcvgaviwdreggtktlfspdkppvkervlgfsqsfqeegyeevggilfk
vvkegkdamqsidlymrsleieevrkhmdknilivkdgpaarelpfeenvgpiglvknig
vtelskedfkklrflkkgkrskmfvssretplkkvgayvklidgegirglvrletyvkdd
nqipyirkvfddlaktlphltadlpiprlpenilpiqfleenlsyyltdknymntrlfay
i
Sequence, based on observed residues (ATOM records): (download)
>d1zupa1 c.55.3.11 (A:1-301) Hypothetical protein TM1739 {Thermotoga maritima [TaxId: 2336]}
mqvrieraerieseleehvgdqtfveesrfleedeqregeildqiifvdgkrrsfvritt
degitgifaelcvgaviwdreggtktlfspdkppvkervlgfsqsfqeegyeevggilfk
vvkegkdamqsidlymrsleieevrkhmdknilivkdgpaarelpfeenvgpiglvknig
vtelskedfkklrflkkgkrskmfvsslkkvgayvklidgegirglvrletyvkddnqip
yirkvfddlaktlphltadlpnilpiqfleenlsyyltdknymntrlfayi
SCOPe Domain Coordinates for d1zupa1:
Click to download the PDB-style file with coordinates for d1zupa1.
(The format of our PDB-style files is described here.)
(The format of our PDB-style files is described here.)
Timeline for d1zupa1:
- d1zupa1 first appeared in SCOP 1.73
- d1zupa1 appears in SCOPe 2.04
- d1zupa1 appears in SCOPe 2.06
- d1zupa1 appears in the current release, SCOPe 2.08
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