Lineage for d1pvla_ (1pvl A:)

  1. Root: SCOPe 2.06
  2. 2250849Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2251912Fold f.6: Leukocidin-like [56958] (1 superfamily)
    subunit fold contains beta-sandwich of Ig-like (grerk-key) topology and a beta-ribbon arm that forms an oligomeric transmembrane barrel
  4. 2251913Superfamily f.6.1: Leukocidin-like [56959] (3 families) (S)
  5. 2251914Family f.6.1.1: Leukocidin (pore-forming toxin) [56960] (5 proteins)
    heptameric fold contains barrel (n=14, S=14) formed by beta-ribbon arms, one from each subunit
    automatically mapped to Pfam PF07968
  6. 2251961Protein Leucocidin K component LukF-PV [56963] (1 species)
  7. 2251962Species Staphylococcus aureus [TaxId:1280] [56964] (1 PDB entry)
  8. 2251963Domain d1pvla_: 1pvl A: [43819]
    complexed with mes

Details for d1pvla_

PDB Entry: 1pvl (more details), 2 Å

PDB Description: structure of the panton-valentine leucocidin f component from staphylococcus aureus
PDB Compounds: (A:) leucocidin

SCOPe Domain Sequences for d1pvla_:

Sequence, based on SEQRES records: (download)

>d1pvla_ f.6.1.1 (A:) Leucocidin K component LukF-PV {Staphylococcus aureus [TaxId: 1280]}
aqhitpvsekkvddkitlykttatsdsdklkisqiltfnfikdksydkdtlilkaagniy
sgytkpnpkdtissqfywgskynisinsdsndsvnvvdyapknqneefqvqqtvgysygg
dinisnglsgggngsksfsetinykqesyrtsldkrtnfkkigwdveahkimnngwgpyg
rdsyhstygnemflgsrqsnlnagqnfleyhkmpvlsrgnfnpefigvlsrkqnaakksk
itvtyqremdrytnfwnqlhwignnykdenrathtsiyevdwenhtvklidtqskeknpm
s

Sequence, based on observed residues (ATOM records): (download)

>d1pvla_ f.6.1.1 (A:) Leucocidin K component LukF-PV {Staphylococcus aureus [TaxId: 1280]}
aqhitpvsekkvddkitlykttatsdsdklkisqiltfnfikdksydkdtlilkaagniy
sgytkpnpkdtissqfywgskynisinsdsndsvnvvdyapknqneefqvqqtvgysygg
dinisnglsgggksfsetinykqesyrtsldkrtnfkkigwdveahkimnngwgpygrds
yhstygnemflgsrqsnlnagqnfleyhkmpvlsrgnfnpefigvlsrkqnaakkskitv
tyqremdrytnfwnqlhwignnykdenrathtsiyevdwenhtvklidtqskeknpms

SCOPe Domain Coordinates for d1pvla_:

Click to download the PDB-style file with coordinates for d1pvla_.
(The format of our PDB-style files is described here.)

Timeline for d1pvla_: