Lineage for d2pgda1 (2pgd A:177-473)

  1. Root: SCOP 1.75
  2. 758332Class a: All alpha proteins [46456] (284 folds)
  3. 773947Fold a.100: 6-phosphogluconate dehydrogenase C-terminal domain-like [48178] (1 superfamily)
    multihelical; common core is formed around two long antiparallel helices related by (pseudo) twofold symmetry
  4. 773948Superfamily a.100.1: 6-phosphogluconate dehydrogenase C-terminal domain-like [48179] (12 families) (S)
    N-terminal domain is Rossmann-fold with a family-specific C-terminal extension
  5. 773949Family a.100.1.1: Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain [48180] (2 proteins)
    Hydroxyisobutyrate dehydrogenase domain is similar to one structural repeat in the 6-phosphogluconate dehydrogenase domain
  6. 773950Protein 6-phosphogluconate dehydrogenase (6PGD) [48181] (2 species)
    duplication; contains two structural repeats
  7. 773951Species Sheep (Ovis orientalis aries) [TaxId:9940] [48182] (5 PDB entries)
  8. 773952Domain d2pgda1: 2pgd A:177-473 [18778]
    Other proteins in same PDB: d2pgda2
    complexed with so4

Details for d2pgda1

PDB Entry: 2pgd (more details), 2 Å

PDB Description: the structure of 6-phosphogluconate dehydrogenase refined at 2 angstroms resolution
PDB Compounds: (A:) 6-phosphogluconate dehydrogenase

SCOP Domain Sequences for d2pgda1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2pgda1 a.100.1.1 (A:177-473) 6-phosphogluconate dehydrogenase (6PGD) {Sheep (Ovis orientalis aries) [TaxId: 9940]}
gaghfvkmvhngieygdmqliceayhlmkdvlglghkemakafeewnkteldsflieita
silkfqdadgkhllpkirdsagqkgtgkwtaisaleygvpvtligeavfarclsslkder
iqaskklkgpqnipfegdkksfledirkalyaskiisyaqgfmllrqaatefgwtlnygg
ialmwrggciirsvflgkikdafdrnpglqnlllddffksavencqdswrraistgvqag
ipmpcfttalsfydgyrhamlpanliqaqrdyfgahtyellakpgqfihtnwtghgg

SCOP Domain Coordinates for d2pgda1:

Click to download the PDB-style file with coordinates for d2pgda1.
(The format of our PDB-style files is described here.)

Timeline for d2pgda1:

View in 3D
Domains from same chain:
(mouse over for more information)
d2pgda2