PDB entry 7bzt

View 7bzt on RCSB PDB site
Description: Cryo-EM structure of mature Coxsackievirus A10 in complex with KRM1 at pH 7.4
Class: virus
Keywords: Picornavirus, Coxsackievirus A10, pH 7.4, mature particle, KRM1, complex, VIRUS
Deposited on 2020-04-28, released 2020-07-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-08-19, with a file datestamp of 2020-08-14.
Experiment type: EM
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Capsid protein VP1
    Species: Coxsackievirus A10 [TaxId:42769]
    Database cross-references and differences (RAF-indexed):
    • PDB 7BZT
    Domains in SCOPe 2.08: d7bzta_
  • Chain 'B':
    Compound: capsid protein VP2
    Species: Coxsackievirus A10 [TaxId:42769]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7bztb_
  • Chain 'C':
    Compound: capsid protein vp3
    Species: Coxsackievirus A10 [TaxId:42769]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7bztc_
  • Chain 'D':
    Compound: capsid protein VP4
    Species: Coxsackievirus A10 [TaxId:42769]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: krm1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7BZT
  • Heterogens: SPH, NAG

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7bztA (A:)
gdpvediihdalgstarraissvtnaesaanttpsshrletgrvpalqaaetgatsnatd
enmietrcvvnrngvlettinhffsrsglvgvvnltdggtdttgyatwdidimgfvqlrr
kcemftymrfnaeftfvtttkngearpymlqymyvppgapkptgrdafqwqtatnpsvfv
kltdppaqvsvpfmspasayqwfydgyptfgqhpetsnttyglcpnnmmgtfavrvvsre
asqlklqtrvymklkhvrawvprpirsqpyllknfpnydsskitnsardrssikqanm

    Sequence, based on observed residues (ATOM records): (download) 
    >7bztA (A:)
aesaanttpsshrletgrvpalqaaetgatsnatdenmietrcvvnrngvlettinhffs
rsglvgvvnltdggtdttgyatwdidimgfvqlrrkcemftymrfnaeftfvtttkngea
rpymlqymyvppgapkptgrdafqwqtatnpsvfvkltdppaqvsvpfmspasayqwfyd
gyptfgqhpetsnttyglcpnnmmgtfavrvvsreasqlklqtrvymklkhvrawvprpi
rsqpyllknfpnydsskitnsardrssikqan

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >7bztB (B:)
spsveacgysdrvaqltvgnssittqeaanivlaygewpeycpdtdatavdkptrpdvsv
nrfytldskmwqenstgwywkfpdvlnktgvfgqnaqfhylyrsgfclhvqcnaskfhqg
allvavipefviagrgsntkpneaphpgftttfpgttgatfhdpyvldsgvplsqaliyp
hqwinlrtnncatvivpyinavpfdsainhsnfglivipvsplkyssgattaipititia
plnsefgglrqavsq

    Sequence, based on observed residues (ATOM records): (download) 
    >7bztB (B:)
sdrvaqltvgnssittqeaanivlaygewpeycpdtdatavdkptrpdvsvnrfytldsk
mwqenstgwywkfpdvlnktgvfgqnaqfhylyrsgfclhvqcnaskfhqgallvavipe
fviagrgsntkpneaphpgftttfpgttgatfhdpyvldsgvplsqaliyphqwinlrtn
ncatvivpyinavpfdsainhsnfglivipvsplkyssgattaipititiaplnsefggl
rqavsq

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >7bztC (C:)
gipaelrpgtnqflttdddtaapilpgftptptihipgevhsllelcrvetilevnntte
atgltrllipvssqnkadelcaafmvdpgrigpwqstlvgqicryytqwsgslkvtfmft
gsfmatgkmlvaysppgsaqpanretamlgthviwdfglqssvslvipwisnthfrtakt
ggnydyytagvvtlwyqtnyvvppetpgeayiiamgaaqdnftlkickdtdevtqqavlq

    Sequence, based on observed residues (ATOM records): (download) 
    >7bztC (C:)
gipaelrpgtnqflttdddtaapilpgftptptihipgevhsllelcrvetilevnntte
atgltrllipvssqnkadelcaafmvdpgrigpwqstlvgqicryytqwsgslkvtfmft
gsfmatgkmlvaysppgsaqpanretamlgthviwdfglqssvslvipwisnthfrtakt
ggnydyytagvvtlwyqtnyvvppetpgeayiiamgaaqdnftlkickdtdevtqqavl

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.