PDB entry 6w78

View 6w78 on RCSB PDB site
Description: crystal structure of a plant ice-binding protein
Class: antifreeze protein
Keywords: antifreeze protein, ice-binding, ice recrystallization inhibition
Deposited on 2020-03-18, released 2021-01-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-01-20, with a file datestamp of 2021-01-15.
Experiment type: XRAY
Resolution: 2.31 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Antifreeze polypeptide
    Species: Daucus carota [TaxId:4039]
    Gene: AFP, afp
    Database cross-references and differences (RAF-indexed):
    • Uniprot O82438 (Start-331)
      • expression tag (332-335)
    Domains in SCOPe 2.08: d6w78a1, d6w78a2
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6w78A (A:)
mniessfcpilcicmiflclpnlsasqrcnnndkqallqiktalknptitdswvsdddcc
gwdlvecdetsnriisliiqddealtgqippqvgdlpylqalwfrklpnlfgkipeeisa
lkdlkslrlsstslsgpvplffpqltkltcldlsfnkllgvippqlstlpnlkalhlern
eltgeipdifgnfagspdiylshnqltgfvpktfaradpirldfsgnrlegdisflfgpk
krlemldfsgnvlsfnfsrvqefppsltyldlnhnqisgslsselakldlqtfnvsdnnl
cgkiptggnlqrfdrtaylhnsclcgaplpecaaaa

    Sequence, based on observed residues (ATOM records): (download) 
    >6w78A (A:)
qrcnnndkqallqiktalknptitdswvsdddccgwdlvecdetsnriisliiqddealt
gqippqvgdlpylqalwfrklpnlfgkipeeisalkdlkslrlsstslsgpvplffpqlt
kltcldlsfnkllgvippqlstlpnlkalhlerneltgeipdifgnfagspdiylshnql
tgfvpktfaradpirldfsgnrlegdisflfgpkkrlemldfsgnvlsfnfsrvqefpps
ltyldlnhnqisgslsselakldlqtfnvsdnnlcgkiptggnlqrfdrtaylhnsclcg
aplpecaaaa