PDB entry 6t1q
View 6t1q on RCSB PDB site
Description: 3C-like protease from Southampton norovirus.
Class: hydrolase
Keywords: Viral protease., HYDROLASE
Deposited on
2019-10-05, released
2020-08-19
The last revision prior to the SCOPe 2.07 freeze date was dated
2020-08-19, with a file datestamp of
2020-08-14.
Experiment type: XRAY
Resolution: 1.3 Å
R-factor: N/A
AEROSPACI score: 0.68
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Genome polyprotein
Species: Southampton virus (serotype 3) [TaxId:37129]
Gene: ORF1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d6t1qa_ - Chain 'B':
Compound: Genome polyprotein
Species: Southampton virus (serotype 3) [TaxId:37129]
Gene: ORF1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d6t1qb_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>6t1qA (A:)
apptlwsrvtkfgsgwgfwvsptvfittthviptsakeffgepltsiaihrageftlfrf
skkirpdltgmileegcpegtvcsvlikrdsgellplavrmgaiasmriqgrlvhgqsgm
lltganakgmdlgtipgdcgapyvykrandwvvcgvhaaatksgntvvcavq
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6t1qB (B:)
tlwsrvtkfgsgwgfwvsptvfittthviptsakeffgepltsiaihrageftlfrfskk
irpdltgmileegcpegtvcsvlikrdsgellplavrmgaiasmriqgrlvhgqsgmllt
ganakgmdlgtipgdcgapyvykrandwvvcgvhaaatksgntvvcavq
Sequence, based on observed residues (ATOM records): (download)
>6t1qB (B:)
tlwsrvtkfgsgwgfwvsptvfittthviptsakeffgepltsiaihrageftlfrfskk
irpdltgmileegcpegtvcsvlikrdsgellplavrmgaiasmriqgrlvhgqsgmllt
dlgtipgdcgapyvykrandwvvcgvhaaatksgntvvcavq