PDB entry 6sev

View 6sev on RCSB PDB site
Description: Structure of Dps from Listeria innocua soaked with 10 mM zinc for 120 minutes
Class: metal binding protein
Keywords: Dps, ferritin-like, Iron uptake, iron nucleation, iron storage, biomineralization, zinc, METAL BINDING PROTEIN
Deposited on 2019-07-30, released 2019-09-25
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-10-23, with a file datestamp of 2019-10-18.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA starvation/stationary phase protection protein
    Species: Listeria innocua [TaxId:1642]
    Gene: EIB90_09245
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6seva_
  • Chain 'B':
    Compound: DNA starvation/stationary phase protection protein
    Species: Listeria innocua [TaxId:1642]
    Gene: EIB90_09245
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6sevb_
  • Chain 'C':
    Compound: DNA starvation/stationary phase protection protein
    Species: Listeria innocua [TaxId:1642]
    Gene: EIB90_09245
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6sevc_
  • Chain 'D':
    Compound: DNA starvation/stationary phase protection protein
    Species: Listeria innocua [TaxId:1642]
    Gene: EIB90_09245
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6sevd_
  • Chain 'E':
    Compound: DNA starvation/stationary phase protection protein
    Species: Listeria innocua [TaxId:1642]
    Gene: EIB90_09245
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6seve_
  • Chain 'F':
    Compound: DNA starvation/stationary phase protection protein
    Species: Listeria innocua [TaxId:1642]
    Gene: EIB90_09245
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6sevf_
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6sevA (A:)
vdtkeflnhqvanlnvftvkihqihwymrghnfftlhekmddlysefgeqmdevaerlla
iggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgieltdkegdd
vtndmliafkasidkhiwmfkaflgkaple

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6sevB (B:)
vdtkeflnhqvanlnvftvkihqihwymrghnfftlhekmddlysefgeqmdevaerlla
iggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgieltdkegdd
vtndmliafkasidkhiwmfkaflgkaple

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6sevC (C:)
vdtkeflnhqvanlnvftvkihqihwymrghnfftlhekmddlysefgeqmdevaerlla
iggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgieltdkegdd
vtndmliafkasidkhiwmfkaflgkaple

    Sequence, based on observed residues (ATOM records): (download) 
    >6sevC (C:)
dtkeflnhqvanlnvftvkihqihwymrghnfftlhekmddlysefgeqmdevaerllai
ggspfstlkeflenasveeapyktmdqlmedlvgtlellrdeykqgieltdkegddvtnd
mliafkasidkhiwmfkaflgkaple

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6sevD (D:)
vdtkeflnhqvanlnvftvkihqihwymrghnfftlhekmddlysefgeqmdevaerlla
iggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgieltdkegdd
vtndmliafkasidkhiwmfkaflgkaple

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6sevE (E:)
vdtkeflnhqvanlnvftvkihqihwymrghnfftlhekmddlysefgeqmdevaerlla
iggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgieltdkegdd
vtndmliafkasidkhiwmfkaflgkaple

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6sevF (F:)
vdtkeflnhqvanlnvftvkihqihwymrghnfftlhekmddlysefgeqmdevaerlla
iggspfstlkeflenasveeapytkpktmdqlmedlvgtlellrdeykqgieltdkegdd
vtndmliafkasidkhiwmfkaflgkaple