PDB entry 6qkn

View 6qkn on RCSB PDB site
Description: Structure of the azide-inhibited form of cytochrome c peroxidase from obligate human pathogenic bacterium Neisseria gonorrhoeae
Class: electron transport
Keywords: Neisseria gonorrhoeae, bacterial peroxidase, ROS detoxification, ELECTRON TRANSPORT
Deposited on 2019-01-29, released 2020-02-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-02-19, with a file datestamp of 2020-02-14.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cytochrome-c peroxidase
    Species: NEISSERIA GONORRHOEAE [TaxId:485]
    Gene: ccpA, E8M64_00570, ERS135259_00627, NCTC13484_01765
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A1D3HIT0 (2-328)
      • initiating methionine (0)
      • expression tag (1)
    Domains in SCOPe 2.08: d6qkna1, d6qkna2
  • Chain 'B':
    Compound: Cytochrome-c peroxidase
    Species: NEISSERIA GONORRHOEAE [TaxId:485]
    Gene: ccpA, E8M64_00570, ERS135259_00627, NCTC13484_01765
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qknb1, d6qknb2
  • Heterogens: HEC, CA, AZI, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6qknA (A:)
mgedqdllkraqgvfqplptveemqkirpfteeqvklghqlwyeprlskgntvscnschn
lasagvdnmptsqghkgqfggrnsptalnaallgsqfwdgraadveeqaggplvnpvema
ndsqeaaaakiakvpeyqemfkkafpedgavsfknittalgafertlltptkwdeylkgn
vnalseqerkgvrafmdngciachngvnlggttfqkfglvqgpywkfiedpkrdkgradv
tkktedefffrvpglrnvaktypyfhngsvweldkavtimgkaqlgkdipkedvdnivvf
lnalsgnvsesartmpelpltapmeskpd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6qknB (B:)
mgedqdllkraqgvfqplptveemqkirpfteeqvklghqlwyeprlskgntvscnschn
lasagvdnmptsqghkgqfggrnsptalnaallgsqfwdgraadveeqaggplvnpvema
ndsqeaaaakiakvpeyqemfkkafpedgavsfknittalgafertlltptkwdeylkgn
vnalseqerkgvrafmdngciachngvnlggttfqkfglvqgpywkfiedpkrdkgradv
tkktedefffrvpglrnvaktypyfhngsvweldkavtimgkaqlgkdipkedvdnivvf
lnalsgnvsesartmpelpltapmeskpd

    Sequence, based on observed residues (ATOM records): (download) 
    >6qknB (B:)
edqdllkraqgvfqplptveemqkirpfteeqvklghqlwyeprlskgntvscnschnla
sagvdnmptsqghkgqfggrnsptalnaallgsqfwdgraadveeqaggplvnpvemand
sqeaaaakiakvpeyqemfkkafpedgavsfknittalgafertlltptkwdeylkgnvn
alseqerkgvrafmdngciachngvnlggttfqkfglvqgpywkfiedpkrdkgradvtk
ktedefffrvpglrnvaktypyfhngsvweldkavtimgkaqlgkdipkedvdnivvfln
alsgnvsesartmpelpltapme