PDB entry 6pu3

View 6pu3 on RCSB PDB site
Description: ABC transporter-associated periplasmic binding protein DppA from Helicobacter pylori
Class: transport protein
Keywords: DppA, type II, periplasmic binding protein, Periplasmic peptide binding protein, TRANSPORT PROTEIN
Deposited on 2019-07-16, released 2019-08-21
The last revision prior to the SCOPe 2.07 freeze date was dated 2019-08-21, with a file datestamp of 2019-08-16.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: heme-binding protein a
    Species: Helicobacter pylori [TaxId:210]
    Gene: hbpA, HPPMSS1_c01141
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6pu3a_
  • Chain 'B':
    Compound: ser-thr-ser-ala
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • PDB 6PU3 (0-3)
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6pu3A (A:)
gidpftsenpnatlnpskenisvkeqkrfggvlvfargadgssmdpalvtdgesyvatgn
iydtlvqfkygtteiepalatswdispdglvytfhlrkgvyfhqtkywnkkvefsakdvl
fsferqmdkakryyspgaksykywegmgmshiiksiealddytirftlngpeapflanlg
mdflsilskdyadyleqnnkkdelakkpvgtgpfkfflwnkdekiillknqdywgpkayl
dkvvvrtipnsstralalrtgeimlmtgpnlneveqleklpnivvdksagllaswlslnt
qkkyfnnplvrlainhainvddyikviyegfaqkmvnpfpptiwgynynikpyeydlkka
kellkqagypngfkttifttstrnpkgavfiqaslakigidvkievyewgaylkrtglge
hemafagwmadiadpdnflytlwskqaasaiptqngsfyksdafsdllikakrvsdqker
ealylkaqeiihkdapyvplaypysvvphlskvkgykttgvsvnrffkvylek

    Sequence, based on observed residues (ATOM records): (download) 
    >6pu3A (A:)
svkeqkrfggvlvfargadgssmdpalvtdgesyvatgniydtlvqfkygtteiepalat
swdispdglvytfhlrkgvyfhqtkywnkkvefsakdvlfsferqmdkakryyspgaksy
kywegmgmshiiksiealddytirftlngpeapflanlgmdflsilskdyadyleqnnkk
delakkpvgtgpfkfflwnkdekiillknqdywgpkayldkvvvrtipnsstralalrtg
eimlmtgpnlneveqleklpnivvdksagllaswlslntqkkyfnnplvrlainhainvd
dyikviyegfaqkmvnpfpptiwgynynikpyeydlkkakellkqagypngfkttiftts
trnpkgavfiqaslakigidvkievyewgaylkrtglgehemafagwmadiadpdnflyt
lwskqaasaiptqngsfyksdafsdllikakrvsdqkerealylkaqeiihkdapyvpla
ypysvvphlskvkgykttgvsvnrffkvylek

  • Chain 'B':
    No sequence available.