PDB entry 6p3q

View 6p3q on RCSB PDB site
Description: Calpain-5 (CAPN5) Protease Core (PC)
Class: hydrolase
Keywords: Cystein protease, peptide binding protein, Calcium binding protein, protease domain, HYDROLASE
Deposited on 2019-05-24, released 2020-02-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-02-05, with a file datestamp of 2020-01-31.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Calpain-5
    Species: Homo sapiens [TaxId:9606]
    Gene: CAPN5, NCL3
    Database cross-references and differences (RAF-indexed):
    • Uniprot O15484 (Start-345)
      • expression tag (346-351)
    Domains in SCOPe 2.08: d6p3qa1, d6p3qa2
  • Chain 'B':
    Compound: Calpain-5
    Species: Homo sapiens [TaxId:9606]
    Gene: CAPN5, NCL3
    Database cross-references and differences (RAF-indexed):
    • Uniprot O15484 (Start-345)
      • expression tag (346-351)
    Domains in SCOPe 2.08: d6p3qb1, d6p3qb2

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6p3qA (A:)
gshmfscvkpyedqnysalrrdcrrrkvlfedplfpatddslyykgtpgpavrwkrpkgi
cedprlfvdgisshdlhqgqvgncwfvaacsslasreslwqkvipdwkeqewdpekpnay
agifhfhfwrfgewvdvviddrlptvnnqliychsnsrnefwcalvekayaklagcyqal
dggntadalvdftggvsepidltegdfandetkrnqlfermlkvhsrgglisasikavta
admearlacglvkghayavtdvrkvrlghgllaffksekldmirlrnpwgerewngpwsd
tseewqkvskserekmgvtvqddgefwmtfedvcryftdiikcrvilenlyfqghhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6p3qA (A:)
cvkpyedqnysalrrdcrrrkvlfedplfpatddslyykgtpgpavrwkrpkgicedprl
fvdgishdlhqgqvgncwfvaacsslasreslwqkvipdwkeqewdpekpnayagifhfh
fwrfgewvdvviddrlptvnnqliychsnsrnefwcalvekayaklagcyqaldggntad
alvdftggvsepidltegdfandetkrnqlfermlkvhsrgglisasikavtaadmearl
acglvkghayavtdvrkvrlghgllaffksekldmirlrnpwgerewngpwsdtseewqk
vskserekmgvtvqddgefwmtfedvcryftdiikcrvilenlyf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6p3qB (B:)
gshmfscvkpyedqnysalrrdcrrrkvlfedplfpatddslyykgtpgpavrwkrpkgi
cedprlfvdgisshdlhqgqvgncwfvaacsslasreslwqkvipdwkeqewdpekpnay
agifhfhfwrfgewvdvviddrlptvnnqliychsnsrnefwcalvekayaklagcyqal
dggntadalvdftggvsepidltegdfandetkrnqlfermlkvhsrgglisasikavta
admearlacglvkghayavtdvrkvrlghgllaffksekldmirlrnpwgerewngpwsd
tseewqkvskserekmgvtvqddgefwmtfedvcryftdiikcrvilenlyfqghhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6p3qB (B:)
vkpyedqnysalrrdcrrrkvlfedplfpatddslyykgtpgpavrwkrpkgicedprlf
vdgisshdlhqgqvgncwfvaacsslasreslwqkvipdwkeqewdpekpnayagifhfh
fwrfgewvdvviddrlptvnnqliychsnsrnefwcalvekayaklagcyqaldggntad
alvdftggvsepidltegdfandetkrnqlfermlkvhsrgglisasikavtaadmearl
acglvkghayavtdvrkvrlghgllaffksekldmirlrnpwgerewngpwsdtseewqk
vskserekmgvtvqddgefwmtfedvcryftdiikcrvilenlyf